data_BST
#

_chem_comp.id                                   BST
_chem_comp.name                                 
;6-(4-AMINO-4-HYDROXY-2-OXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-3-[3-AMINO-5-(N-METHYL-GUANIDINO)-PENT
ANOYLAMINO]-3,6-DIHYDRO-2H-PYRAN-2-CARBOXYLIC ACID
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H28 N8 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "TETRAHEDRAL INTERMEDIATE OF BLASTICIDIN S"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-07-30
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       440.454
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BST
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1WN6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BST  O4      O4      O  0  1  N  N  N  46.699  17.262  36.298   -0.025  -3.307   0.498  O4      BST   1  
BST  N1      N1      N  0  1  N  N  N  43.455  14.725  38.711    4.741   0.297   0.586  N1      BST   2  
BST  C2      C2      C  0  1  N  N  N  42.478  13.701  38.358    4.939   0.577  -0.710  C2      BST   3  
BST  O2      O2      O  0  1  N  N  N  41.479  13.936  37.687    3.997   0.526  -1.476  O2      BST   4  
BST  N3      N3      N  0  1  N  N  N  42.706  12.384  38.820    6.153   0.923  -1.184  N3      BST   5  
BST  C4      C4      C  0  1  N  N  S  43.892  12.100  39.621    7.282   0.979  -0.241  C4      BST   6  
BST  C5      C5      C  0  1  N  N  N  44.885  13.215  39.961    6.990   0.645   1.207  C5      BST   7  
BST  C6      C6      C  0  1  N  N  N  44.623  14.435  39.501    5.751   0.326   1.534  C6      BST   8  
BST  "C1'"   "C1'"   C  0  1  N  N  R  43.193  16.108  38.203    3.390  -0.065   1.020  "C1'"   BST   9  
BST  "C2'"   "C2'"   C  0  1  N  N  N  42.735  17.108  39.223    2.480   1.115   0.839  "C2'"   BST  10  
BST  "C3'"   "C3'"   C  0  1  N  N  N  43.190  18.381  39.319    1.251   0.991   0.421  "C3'"   BST  11  
BST  "C4'"   "C4'"   C  0  1  N  N  S  44.299  18.723  38.238    0.676  -0.363   0.092  "C4'"   BST  12  
BST  "C5'"   "C5'"   C  0  1  N  N  S  44.365  17.780  37.000    1.591  -1.449   0.665  "C5'"   BST  13  
BST  "O5'"   "O5'"   O  0  1  N  N  N  44.428  16.462  37.543    2.934  -1.178   0.254  "O5'"   BST  14  
BST  O3      O3      O  0  1  N  N  N  45.453  18.587  35.004    1.901  -3.426  -0.578  O3      BST  15  
BST  "C6'"   "C6'"   C  0  1  N  N  N  45.632  17.791  36.140    1.167  -2.800   0.149  "C6'"   BST  16  
BST  N6      N6      N  0  1  N  N  N  44.142  20.103  37.756   -0.659  -0.484   0.683  N6      BST  17  
BST  C7      C7      C  0  1  N  N  N  45.060  21.162  37.699   -1.735  -0.014   0.021  C7      BST  18  
BST  O7      O7      O  0  1  N  N  N  46.223  21.007  38.099   -1.598   0.510  -1.064  O7      BST  19  
BST  C8      C8      C  0  1  N  N  N  44.542  22.481  37.122   -3.108  -0.139   0.630  C8      BST  20  
BST  C9      C9      C  0  1  N  N  S  45.345  23.745  37.538   -4.143   0.468  -0.319  C9      BST  21  
BST  N9      N9      N  0  1  N  N  N  46.764  23.747  37.148   -4.194  -0.319  -1.558  N9      BST  22  
BST  C10     C10     C  0  1  N  N  N  44.693  25.039  36.953   -5.519   0.454   0.351  C10     BST  23  
BST  C11     C11     C  0  1  N  N  N  43.765  25.779  37.960   -6.530   1.174  -0.544  C11     BST  24  
BST  N12     N12     N  0  1  N  N  N  43.025  26.915  37.394   -7.847   1.160   0.097  N12     BST  25  
BST  C13     C13     C  0  1  N  N  N  43.732  28.198  37.287   -8.236   2.251   0.995  C13     BST  26  
BST  C14     C14     C  0  1  N  N  N  41.678  26.758  36.952   -8.718   0.124  -0.144  C14     BST  27  
BST  N14     N14     N  0  1  N  N  N  40.871  27.939  37.042   -8.372  -0.846  -0.942  N14     BST  28  
BST  N15     N15     N  0  1  N  N  N  41.129  25.678  36.491   -9.954   0.111   0.458  N15     BST  29  
BST  N4      N4      N  0  1  N  N  N  44.687  11.065  38.875    7.843   2.336  -0.287  N4      BST  30  
BST  O6      O6      O  0  1  N  N  N  43.362  11.525  40.798    8.287   0.076  -0.706  O6      BST  31  
BST  HO4     HO4     H  0  1  N  N  N  47.485  17.269  35.765   -0.297  -4.175   0.167  HO4     BST  32  
BST  HN3     HN3     H  0  1  N  N  N  42.032  11.657  38.581    6.279   1.128  -2.124  HN3     BST  33  
BST  H5      H5      H  0  1  N  N  N  45.813  13.137  40.552    7.773   0.667   1.951  H5      BST  34  
BST  H6      H6      H  0  1  N  N  N  45.369  15.201  39.773    5.520   0.085   2.561  H6      BST  35  
BST  "H1'"   "H1'"   H  0  1  N  N  N  42.312  16.123  37.520    3.414  -0.341   2.074  "H1'"   BST  36  
BST  "H2'"   "H2'"   H  0  1  N  N  N  41.976  16.881  39.991    2.856   2.102   1.062  "H2'"   BST  37  
BST  "H3'"   "H3'"   H  0  1  N  N  N  42.749  19.008  40.112    0.637   1.871   0.308  "H3'"   BST  38  
BST  "H4'"   "H4'"   H  0  1  N  N  N  45.256  18.576  38.791    0.607  -0.477  -0.990  "H4'"   BST  39  
BST  "H5'"   "H5'"   H  0  1  N  N  N  43.507  18.102  36.365    1.532  -1.438   1.753  "H5'"   BST  40  
BST  HN6     HN6     H  0  1  N  N  N  43.228  20.376  37.395   -0.769  -0.903   1.551  HN6     BST  41  
BST  H81     1H8     H  0  1  N  N  N  43.463  22.612  37.372   -3.133   0.390   1.582  H81     BST  42  
BST  H82     2H8     H  0  1  N  N  N  44.479  22.415  36.011   -3.338  -1.192   0.793  H82     BST  43  
BST  H9      H9      H  0  1  N  N  N  45.308  23.725  38.652   -3.863   1.496  -0.552  H9      BST  44  
BST  HN91    1HN9    H  0  0  N  N  N  46.851  23.592  36.144   -3.249  -0.369  -1.909  HN91    BST  45  
BST  HN92    2HN9    H  0  0  N  N  N  47.291  24.577  37.421   -4.456  -1.257  -1.295  HN92    BST  46  
BST  H101    1H10    H  0  0  N  N  N  44.147  24.813  36.007   -5.460   0.963   1.313  H101    BST  47  
BST  H102    2H10    H  0  0  N  N  N  45.474  25.729  36.556   -5.838  -0.577   0.504  H102    BST  48  
BST  H111    1H11    H  0  0  N  N  N  44.346  26.103  38.855   -6.589   0.665  -1.507  H111    BST  49  
BST  H112    2H11    H  0  0  N  N  N  43.061  25.059  38.438   -6.211   2.205  -0.697  H112    BST  50  
BST  H131    1H13    H  0  0  N  N  N  44.678  28.052  36.715   -7.423   2.974   1.061  H131    BST  51  
BST  H132    2H13    H  0  0  N  N  N  43.170  29.060  36.857   -9.127   2.741   0.605  H132    BST  52  
BST  H133    3H13    H  0  0  N  N  N  44.135  28.482  38.287   -8.446   1.848   1.985  H133    BST  53  
BST  H14     H14     H  0  1  N  N  N  41.312  28.857  36.978   -8.986  -1.577  -1.112  H14     BST  54  
BST  H151    1H15    H  0  0  N  N  N  41.279  24.961  37.200  -10.211   0.833   1.053  H151    BST  55  
BST  H152    2H15    H  0  0  N  N  N  40.166  25.566  36.175  -10.568  -0.620   0.289  H152    BST  56  
BST  HN41    1HN4    H  0  0  N  N  N  44.906  11.341  37.918    8.030   2.539  -1.258  HN41    BST  57  
BST  HN42    2HN4    H  0  0  N  N  N  45.516  10.867  39.435    7.108   2.963   0.004  HN42    BST  58  
BST  HO6     HO6     H  0  1  N  N  N  44.134  11.340  41.320    8.460   0.303  -1.630  HO6     BST  59  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BST  O4     "C6'"   SING  N  N   1  
BST  O4     HO4     SING  N  N   2  
BST  N1     C2      SING  N  N   3  
BST  N1     C6      SING  N  N   4  
BST  N1     "C1'"   SING  N  N   5  
BST  C2     O2      DOUB  N  N   6  
BST  C2     N3      SING  N  N   7  
BST  N3     C4      SING  N  N   8  
BST  N3     HN3     SING  N  N   9  
BST  C4     C5      SING  N  N  10  
BST  C4     N4      SING  N  N  11  
BST  C4     O6      SING  N  N  12  
BST  C5     C6      DOUB  N  N  13  
BST  C5     H5      SING  N  N  14  
BST  C6     H6      SING  N  N  15  
BST  "C1'"  "C2'"   SING  N  N  16  
BST  "C1'"  "O5'"   SING  N  N  17  
BST  "C1'"  "H1'"   SING  N  N  18  
BST  "C2'"  "C3'"   DOUB  N  N  19  
BST  "C2'"  "H2'"   SING  N  N  20  
BST  "C3'"  "C4'"   SING  N  N  21  
BST  "C3'"  "H3'"   SING  N  N  22  
BST  "C4'"  "C5'"   SING  N  N  23  
BST  "C4'"  N6      SING  N  N  24  
BST  "C4'"  "H4'"   SING  N  N  25  
BST  "C5'"  "O5'"   SING  N  N  26  
BST  "C5'"  "C6'"   SING  N  N  27  
BST  "C5'"  "H5'"   SING  N  N  28  
BST  O3     "C6'"   DOUB  N  N  29  
BST  N6     C7      SING  N  N  30  
BST  N6     HN6     SING  N  N  31  
BST  C7     O7      DOUB  N  N  32  
BST  C7     C8      SING  N  N  33  
BST  C8     C9      SING  N  N  34  
BST  C8     H81     SING  N  N  35  
BST  C8     H82     SING  N  N  36  
BST  C9     N9      SING  N  N  37  
BST  C9     C10     SING  N  N  38  
BST  C9     H9      SING  N  N  39  
BST  N9     HN91    SING  N  N  40  
BST  N9     HN92    SING  N  N  41  
BST  C10    C11     SING  N  N  42  
BST  C10    H101    SING  N  N  43  
BST  C10    H102    SING  N  N  44  
BST  C11    N12     SING  N  N  45  
BST  C11    H111    SING  N  N  46  
BST  C11    H112    SING  N  N  47  
BST  N12    C13     SING  N  N  48  
BST  N12    C14     SING  N  N  49  
BST  C13    H131    SING  N  N  50  
BST  C13    H132    SING  N  N  51  
BST  C13    H133    SING  N  N  52  
BST  C14    N14     DOUB  N  N  53  
BST  C14    N15     SING  N  N  54  
BST  N14    H14     SING  N  N  55  
BST  N15    H151    SING  N  N  56  
BST  N15    H152    SING  N  N  57  
BST  N4     HN41    SING  N  N  58  
BST  N4     HN42    SING  N  N  59  
BST  O6     HO6     SING  N  N  60  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BST  SMILES            ACDLabs               10.04  "O=C1NC(O)(N)C=CN1C2OC(C(=O)O)C(C=C2)NC(=O)CC(N)CCN(C(=[N@H])N)C"  
BST  SMILES_CANONICAL  CACTVS                3.341  "CN(CC[C@H](N)CC(=O)N[C@H]1C=C[C@@H](O[C@@H]1C(O)=O)N2C=C[C@@](N)(O)NC2=O)C(N)=N"  
BST  SMILES            CACTVS                3.341  "CN(CC[CH](N)CC(=O)N[CH]1C=C[CH](O[CH]1C(O)=O)N2C=C[C](N)(O)NC2=O)C(N)=N"  
BST  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CN(CC[C@@H](CC(=O)N[C@H]1C=C[C@@H](O[C@@H]1C(=O)O)N2C=C[C@@](NC2=O)(N)O)N)C(=N)N"  
BST  SMILES            "OpenEye OEToolkits"  1.5.0  "CN(CCC(CC(=O)NC1C=CC(OC1C(=O)O)N2C=CC(NC2=O)(N)O)N)C(=N)N"  
BST  InChI             InChI                 1.03   "InChI=1S/C17H28N8O6/c1-24(15(19)20)6-4-9(18)8-11(26)22-10-2-3-12(31-13(10)14(27)28)25-7-5-17(21,30)23-16(25)29/h2-3,5,7,9-10,12-13,30H,4,6,8,18,21H2,1H3,(H3,19,20)(H,22,26)(H,23,29)(H,27,28)/t9-,10-,12+,13-,17-/m0/s1"  
BST  InChIKey          InChI                 1.03   MVFPGTZTOAHVBP-HXYLPHSESA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BST  "SYSTEMATIC NAME"  ACDLabs               10.04  "(4S)-4-amino-1-[4-({(3S)-3-amino-5-[carbamimidoyl(methyl)amino]pentanoyl}amino)-2,3,4-trideoxy-beta-D-erythro-hex-2-enopyranuronosyl]-4-hydroxy-3,4-dihydropyrimidin-2(1H)-one"  
BST  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3S,6R)-3-[[(3S)-3-amino-5-(carbamimidoyl-methyl-amino)pentanoyl]amino]-6-[(4S)-4-amino-4-hydroxy-2-oxo-3H-pyrimidin-1-yl]-3,6-dihydro-2H-pyran-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BST  "Create component"   2004-07-30  RCSB  
BST  "Modify descriptor"  2011-06-04  RCSB  
BST  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     BST
_pdbx_chem_comp_synonyms.name        "TETRAHEDRAL INTERMEDIATE OF BLASTICIDIN S"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
