data_ERT
#

_chem_comp.id                                   ERT
_chem_comp.name                                 "METHYL (4R)-2-ETHYL-2,5,12-TRIHYDROXY-7-METHOXY-6,11-DIOXO-4-{[2,3,6-TRIDEOXY-3-(DIMETHYLAMINO)-BETA-D-RIBO-HEXOPYRANOSYL]OXY}-1H,2H,3H,4H,6H,11H-TETRACENE-1-CARBOXYLATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H37 N O11"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-METHOXY-E-RHODOMYCIN T"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-07-06
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       599.626
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ERT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1TW3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ERT  O11     O11   O  0  1  N  N  N  63.068   0.550  39.955  -2.011   2.838  -1.506  O11     ERT   1  
ERT  C11     C11   C  0  1  Y  N  N  61.942   0.418  39.439  -1.669   1.710  -0.837  C11     ERT   2  
ERT  C18     C18   C  0  1  Y  N  N  61.559   1.332  38.456  -2.611   0.702  -0.654  C18     ERT   3  
ERT  C17     C17   C  0  1  Y  N  N  60.223   1.160  37.865  -2.247  -0.470   0.043  C17     ERT   4  
ERT  C6      C6    C  0  1  Y  N  N  59.429   0.110  38.300  -0.950  -0.600   0.531  C6      ERT   5  
ERT  O6      O6    O  0  1  N  N  N  58.238  -0.049  37.755  -0.592  -1.724   1.199  O6      ERT   6  
ERT  C5      C5    C  0  1  N  N  N  59.780   2.113  36.819  -3.242  -1.540   0.243  C5      ERT   7  
ERT  O5      O5    O  0  1  N  N  N  58.651   2.001  36.281  -2.892  -2.645   0.612  O5      ERT   8  
ERT  C16     C16   C  0  1  Y  N  N  60.708   3.205  36.418  -4.668  -1.254  -0.009  C16     ERT   9  
ERT  C4      C4    C  0  1  Y  N  N  60.331   4.141  35.440  -5.659  -2.131   0.438  C4      ERT  10  
ERT  O4      O4    O  0  1  N  N  N  59.120   4.110  34.857  -5.320  -3.259   1.110  O4      ERT  11  
ERT  C40     C40   C  0  1  N  N  N  58.803   3.443  33.645  -6.539  -3.934   1.427  C40     ERT  12  
ERT  C3      C3    C  0  1  Y  N  N  61.207   5.154  35.073  -6.998  -1.841   0.190  C3      ERT  13  
ERT  C2      C2    C  0  1  Y  N  N  62.450   5.239  35.677  -7.348  -0.694  -0.494  C2      ERT  14  
ERT  C15     C15   C  0  1  Y  N  N  61.963   3.285  37.029  -5.033  -0.086  -0.705  C15     ERT  15  
ERT  C1      C1    C  0  1  Y  N  N  62.826   4.311  36.643  -6.375   0.184  -0.943  C1      ERT  16  
ERT  C12     C12   C  0  1  N  N  N  62.374   2.392  38.024  -3.983   0.843  -1.176  C12     ERT  17  
ERT  O12     O12   O  0  1  N  N  N  63.511   2.551  38.531  -4.247   1.712  -1.984  O12     ERT  18  
ERT  C19     C19   C  0  1  Y  N  N  61.115  -0.636  39.860  -0.368   1.566  -0.333  C19     ERT  19  
ERT  C10     C10   C  0  1  N  N  R  61.610  -1.564  40.932   0.590   2.708  -0.558  C10     ERT  20  
ERT  C21     C21   C  0  1  N  N  N  61.788  -0.750  42.218   0.277   3.817   0.413  C21     ERT  21  
ERT  O13     O13   O  0  1  N  N  N  60.765   0.116  42.702   0.948   3.955   1.409  O13     ERT  22  
ERT  O10     O10   O  0  1  N  N  N  62.987  -0.936  42.971  -0.747   4.651   0.173  O10     ERT  23  
ERT  C22     C22   C  0  1  N  N  N  63.190   0.027  44.016  -1.048   5.720   1.109  C22     ERT  24  
ERT  C20     C20   C  0  1  Y  N  N  59.851  -0.771  39.292  -0.012   0.424   0.338  C20     ERT  25  
ERT  C7      C7    C  0  1  N  N  S  58.935  -1.880  39.679   1.372   0.208   0.893  C7      ERT  26  
ERT  C8      C8    C  0  1  N  N  N  59.245  -2.406  41.071   2.122   1.534   1.002  C8      ERT  27  
ERT  C9      C9    C  0  1  N  N  R  60.711  -2.771  41.250   2.032   2.251  -0.351  C9      ERT  28  
ERT  C13     C13   C  0  1  N  N  N  60.827  -3.278  42.695   2.963   3.465  -0.354  C13     ERT  29  
ERT  C14     C14   C  0  1  N  N  N  62.161  -3.939  43.006   4.390   3.013  -0.035  C14     ERT  30  
ERT  O9      O9    O  0  1  N  N  N  61.091  -3.869  40.399   2.407   1.353  -1.397  O9      ERT  31  
ERT  O7      O7    O  0  1  N  N  N  59.087  -2.928  38.707   2.094  -0.671   0.028  O7      ERT  32  
ERT  "C1'"   C1*   C  0  1  N  N  R  57.952  -3.770  38.484   2.558  -1.755   0.835  "C1'"   ERT  33  
ERT  "C2'"   C2*   C  0  1  N  N  N  57.262  -3.371  37.182   3.205  -2.815  -0.060  "C2'"   ERT  34  
ERT  "C3'"   C3*   C  0  1  N  N  S  58.203  -3.622  36.006   4.367  -2.176  -0.829  "C3'"   ERT  35  
ERT  "N3'"   N3*   N  0  1  N  N  N  57.516  -3.121  34.794   5.093  -3.213  -1.576  "N3'"   ERT  36  
ERT  "C7'"   C7*   C  0  1  N  N  N  57.753  -1.924  34.444   4.127  -3.821  -2.501  "C7'"   ERT  37  
ERT  "C8'"   C8*   C  0  1  N  N  N  56.687  -3.804  34.110   6.089  -2.518  -2.402  "C8'"   ERT  38  
ERT  "C4'"   C4*   C  0  1  N  N  S  58.596  -5.105  35.962   5.311  -1.506   0.176  "C4'"   ERT  39  
ERT  "O4'"   O4*   O  0  1  N  N  N  57.487  -5.971  35.773   5.924  -2.503   0.994  "O4'"   ERT  40  
ERT  "C5'"   C5*   C  0  1  N  N  S  59.267  -5.432  37.300   4.504  -0.545   1.053  "C5'"   ERT  41  
ERT  "O5'"   O5*   O  0  1  N  N  N  58.371  -5.143  38.390   3.514  -1.271   1.776  "O5'"   ERT  42  
ERT  "C6'"   C6*   C  0  1  N  N  N  59.725  -6.889  37.401   5.443   0.153   2.038  "C6'"   ERT  43  
ERT  H11     H11   H  0  1  N  N  N  63.329  -0.072  40.624  -2.346   3.463  -0.848  H11     ERT  44  
ERT  HO6     HO6   H  0  1  N  N  N  57.694  -0.768  38.053  -0.780  -1.566   2.134  HO6     ERT  45  
ERT  H401    1H40  H  0  0  N  N  N  59.120   2.382  33.775  -7.162  -3.288   2.045  H401    ERT  46  
ERT  H402    2H40  H  0  0  N  N  N  57.799   3.417  33.162  -7.069  -4.177   0.506  H402    ERT  47  
ERT  H403    3H40  H  0  0  N  N  N  59.515   3.826  32.877  -6.315  -4.852   1.971  H403    ERT  48  
ERT  H4      H4    H  0  1  N  N  N  60.916   5.889  34.304  -7.766  -2.517   0.534  H4      ERT  49  
ERT  H3      H3    H  0  1  N  N  N  63.142   6.048  35.388  -8.390  -0.480  -0.681  H3      ERT  50  
ERT  H2      H2    H  0  1  N  N  N  63.822   4.390  37.109  -6.660   1.079  -1.476  H2      ERT  51  
ERT  H10     H10   H  0  1  N  N  N  62.559  -1.997  40.537   0.474   3.079  -1.576  H10     ERT  52  
ERT  H221    1H22  H  0  0  N  N  N  62.306   0.055  44.695  -1.905   6.288   0.748  H221    ERT  53  
ERT  H222    2H22  H  0  0  N  N  N  64.126  -0.118  44.604  -1.279   5.293   2.085  H222    ERT  54  
ERT  H223    3H22  H  0  0  N  N  N  63.148   1.062  43.603  -0.185   6.380   1.196  H223    ERT  55  
ERT  H7      H7    H  0  1  N  N  N  57.885  -1.505  39.702   1.296  -0.244   1.882  H7      ERT  56  
ERT  H81     1H8   H  0  1  N  N  N  58.585  -3.267  41.329   3.166   1.347   1.249  H81     ERT  57  
ERT  H82     2H8   H  0  1  N  N  N  58.915  -1.684  41.854   1.665   2.152   1.776  H82     ERT  58  
ERT  H131    1H13  H  0  0  N  N  N  59.982  -3.963  42.941   2.631   4.179   0.399  H131    ERT  59  
ERT  H132    2H13  H  0  0  N  N  N  60.617  -2.456  43.418   2.942   3.936  -1.337  H132    ERT  60  
ERT  H141    1H14  H  0  0  N  N  N  63.006  -3.254  42.760   4.411   2.542   0.947  H141    ERT  61  
ERT  H142    2H14  H  0  0  N  N  N  62.245  -4.307  44.055   4.722   2.299  -0.789  H142    ERT  62  
ERT  H143    3H14  H  0  0  N  N  N  62.371  -4.761  42.283   5.054   3.878  -0.038  H143    ERT  63  
ERT  HO9     HO9   H  0  1  N  N  N  60.536  -4.614  40.595   3.319   1.084  -1.221  HO9     ERT  64  
ERT  "H1'"   H1*   H  0  1  N  N  N  57.244  -3.653  39.337   1.716  -2.197   1.368  "H1'"   ERT  65  
ERT  "H2'1"  1H2*  H  0  0  N  N  N  56.892  -2.320  37.207   3.581  -3.632   0.555  "H2'1"  ERT  66  
ERT  "H2'2"  2H2*  H  0  0  N  N  N  56.280  -3.883  37.052   2.467  -3.196  -0.766  "H2'2"  ERT  67  
ERT  "H3'"   H3*   H  0  1  N  N  N  59.172  -3.077  36.097   3.981  -1.429  -1.523  "H3'"   ERT  68  
ERT  "H7'1"  1H7*  H  0  0  N  N  N  58.853  -1.782  34.331   4.621  -4.600  -3.081  "H7'1"  ERT  69  
ERT  "H7'2"  2H7*  H  0  0  N  N  N  57.236  -1.547  33.531   3.304  -4.256  -1.933  "H7'2"  ERT  70  
ERT  "H7'3"  3H7*  H  0  0  N  N  N  57.542  -1.240  35.299   3.740  -3.057  -3.175  "H7'3"  ERT  71  
ERT  "H8'1"  1H8*  H  0  0  N  N  N  55.896  -4.156  34.812   6.767  -1.958  -1.759  "H8'1"  ERT  72  
ERT  "H8'2"  2H8*  H  0  0  N  N  N  56.170  -3.427  33.197   6.657  -3.249  -2.978  "H8'2"  ERT  73  
ERT  "H8'3"  3H8*  H  0  0  N  N  N  57.201  -4.752  33.826   5.584  -1.833  -3.082  "H8'3"  ERT  74  
ERT  "H4'"   H4*   H  0  1  N  N  N  59.274  -5.267  35.092   6.080  -0.950  -0.361  "H4'"   ERT  75  
ERT  H1      H1    H  0  1  N  N  N  57.730  -6.889  35.746   6.508  -2.039   1.610  H1      ERT  76  
ERT  "H5'"   H5*   H  0  1  N  N  N  60.176  -4.789  37.360   4.020   0.201   0.423  "H5'"   ERT  77  
ERT  "H6'1"  1H6*  H  0  0  N  N  N  60.390  -7.157  36.547   6.199   0.712   1.486  "H6'1"  ERT  78  
ERT  "H6'2"  2H6*  H  0  0  N  N  N  60.213  -7.127  38.375   4.869   0.838   2.664  "H6'2"  ERT  79  
ERT  "H6'3"  3H6*  H  0  0  N  N  N  58.879  -7.587  37.200   5.930  -0.592   2.667  "H6'3"  ERT  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ERT  O11    C11     SING  N  N   1  
ERT  O11    H11     SING  N  N   2  
ERT  C11    C18     DOUB  Y  N   3  
ERT  C11    C19     SING  Y  N   4  
ERT  C18    C17     SING  Y  N   5  
ERT  C18    C12     SING  N  N   6  
ERT  C17    C6      DOUB  Y  N   7  
ERT  C17    C5      SING  N  N   8  
ERT  C6     O6      SING  N  N   9  
ERT  C6     C20     SING  Y  N  10  
ERT  O6     HO6     SING  N  N  11  
ERT  C5     O5      DOUB  N  N  12  
ERT  C5     C16     SING  N  N  13  
ERT  C16    C4      DOUB  Y  N  14  
ERT  C16    C15     SING  Y  N  15  
ERT  C4     O4      SING  N  N  16  
ERT  C4     C3      SING  Y  N  17  
ERT  O4     C40     SING  N  N  18  
ERT  C40    H401    SING  N  N  19  
ERT  C40    H402    SING  N  N  20  
ERT  C40    H403    SING  N  N  21  
ERT  C3     C2      DOUB  Y  N  22  
ERT  C3     H4      SING  N  N  23  
ERT  C2     C1      SING  Y  N  24  
ERT  C2     H3      SING  N  N  25  
ERT  C15    C1      DOUB  Y  N  26  
ERT  C15    C12     SING  N  N  27  
ERT  C1     H2      SING  N  N  28  
ERT  C12    O12     DOUB  N  N  29  
ERT  C19    C10     SING  N  N  30  
ERT  C19    C20     DOUB  Y  N  31  
ERT  C10    C21     SING  N  N  32  
ERT  C10    C9      SING  N  N  33  
ERT  C10    H10     SING  N  N  34  
ERT  C21    O13     DOUB  N  N  35  
ERT  C21    O10     SING  N  N  36  
ERT  O10    C22     SING  N  N  37  
ERT  C22    H221    SING  N  N  38  
ERT  C22    H222    SING  N  N  39  
ERT  C22    H223    SING  N  N  40  
ERT  C20    C7      SING  N  N  41  
ERT  C7     C8      SING  N  N  42  
ERT  C7     O7      SING  N  N  43  
ERT  C7     H7      SING  N  N  44  
ERT  C8     C9      SING  N  N  45  
ERT  C8     H81     SING  N  N  46  
ERT  C8     H82     SING  N  N  47  
ERT  C9     C13     SING  N  N  48  
ERT  C9     O9      SING  N  N  49  
ERT  C13    C14     SING  N  N  50  
ERT  C13    H131    SING  N  N  51  
ERT  C13    H132    SING  N  N  52  
ERT  C14    H141    SING  N  N  53  
ERT  C14    H142    SING  N  N  54  
ERT  C14    H143    SING  N  N  55  
ERT  O9     HO9     SING  N  N  56  
ERT  O7     "C1'"   SING  N  N  57  
ERT  "C1'"  "C2'"   SING  N  N  58  
ERT  "C1'"  "O5'"   SING  N  N  59  
ERT  "C1'"  "H1'"   SING  N  N  60  
ERT  "C2'"  "C3'"   SING  N  N  61  
ERT  "C2'"  "H2'1"  SING  N  N  62  
ERT  "C2'"  "H2'2"  SING  N  N  63  
ERT  "C3'"  "N3'"   SING  N  N  64  
ERT  "C3'"  "C4'"   SING  N  N  65  
ERT  "C3'"  "H3'"   SING  N  N  66  
ERT  "N3'"  "C7'"   SING  N  N  67  
ERT  "N3'"  "C8'"   SING  N  N  68  
ERT  "C7'"  "H7'1"  SING  N  N  69  
ERT  "C7'"  "H7'2"  SING  N  N  70  
ERT  "C7'"  "H7'3"  SING  N  N  71  
ERT  "C8'"  "H8'1"  SING  N  N  72  
ERT  "C8'"  "H8'2"  SING  N  N  73  
ERT  "C8'"  "H8'3"  SING  N  N  74  
ERT  "C4'"  "O4'"   SING  N  N  75  
ERT  "C4'"  "C5'"   SING  N  N  76  
ERT  "C4'"  "H4'"   SING  N  N  77  
ERT  "O4'"  H1      SING  N  N  78  
ERT  "C5'"  "O5'"   SING  N  N  79  
ERT  "C5'"  "C6'"   SING  N  N  80  
ERT  "C5'"  "H5'"   SING  N  N  81  
ERT  "C6'"  "H6'1"  SING  N  N  82  
ERT  "C6'"  "H6'2"  SING  N  N  83  
ERT  "C6'"  "H6'3"  SING  N  N  84  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ERT  SMILES            ACDLabs               10.04  "O=C2c1c(O)c5c(c(O)c1C(=O)c3cccc(OC)c23)C(C(=O)OC)C(O)(CC5OC4OC(C(O)C(N(C)C)C4)C)CC"  
ERT  SMILES_CANONICAL  CACTVS                3.341  "CC[C@@]1(O)C[C@H](O[C@H]2C[C@@H]([C@H](O)[C@H](C)O2)N(C)C)c3c(O)c4C(=O)c5c(OC)cccc5C(=O)c4c(O)c3[C@H]1C(=O)OC"  
ERT  SMILES            CACTVS                3.341  "CC[C]1(O)C[CH](O[CH]2C[CH]([CH](O)[CH](C)O2)N(C)C)c3c(O)c4C(=O)c5c(OC)cccc5C(=O)c4c(O)c3[CH]1C(=O)OC"  
ERT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC[C@]1(C[C@@H](c2c(c(c3c(c2O)C(=O)c4c(cccc4OC)C3=O)O)[C@H]1C(=O)OC)O[C@H]5C[C@@H]([C@@H]([C@@H](O5)C)O)N(C)C)O"  
ERT  SMILES            "OpenEye OEToolkits"  1.5.0  "CCC1(CC(c2c(c(c3c(c2O)C(=O)c4c(cccc4OC)C3=O)O)C1C(=O)OC)OC5CC(C(C(O5)C)O)N(C)C)O"  
ERT  InChI             InChI                 1.03   "InChI=1S/C31H37NO11/c1-7-31(39)12-17(43-18-11-15(32(3)4)25(33)13(2)42-18)20-21(24(31)30(38)41-6)29(37)22-23(28(20)36)27(35)19-14(26(22)34)9-8-10-16(19)40-5/h8-10,13,15,17-18,24-25,33,36-37,39H,7,11-12H2,1-6H3/t13-,15-,17-,18-,24-,25+,31+/m0/s1"  
ERT  InChIKey          InChI                 1.03   XSSVYBYWQBNYOH-QJIXERIWSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ERT  "SYSTEMATIC NAME"  ACDLabs               10.04  "methyl (1R,2R,4S)-2-ethyl-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-4-{[2,3,6-trideoxy-3-(dimethylamino)-alpha-L-lyxo-hexopyranosyl]oxy}-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate"  
ERT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "methyl (1R,2R,4S)-4-[(2R,4S,5S,6S)-4-dimethylamino-5-hydroxy-6-methyl-oxan-2-yl]oxy-2-ethyl-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ERT  "Create component"   2004-07-06  RCSB  
ERT  "Modify descriptor"  2011-06-04  RCSB  
ERT  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     ERT
_pdbx_chem_comp_synonyms.name        "4-METHOXY-E-RHODOMYCIN T"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
