data_LHT
#

_chem_comp.id                                   LHT
_chem_comp.name                                 "hydrolysed ertapenem"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H27 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-19
_chem_comp.pdbx_modified_date                   2020-03-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       493.530
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LHT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RZS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LHT  C11  C1   C  0  1  Y  N  N   -6.397  16.437  -17.943  -8.340  -0.271  -0.163  C11  LHT   1  
LHT  C18  C2   C  0  1  N  N  S  -12.101   5.895  -16.134   4.589  -0.323  -0.457  C18  LHT   2  
LHT  C17  C3   C  0  1  N  N  N  -12.526   9.473  -15.290   2.189   2.496  -0.554  C17  LHT   3  
LHT  C6   C4   C  0  1  N  N  S   -7.153  10.418  -15.624  -2.109  -1.946  -0.536  C6   LHT   4  
LHT  O6   O1   O  0  1  N  N  N  -14.823   5.933  -15.152   7.180   1.834   0.405  O6   LHT   5  
LHT  C5   C5   C  0  1  N  N  N   -9.390  10.878  -15.877  -0.169  -0.728  -1.245  C5   LHT   6  
LHT  O5   O2   O  0  1  N  N  N  -12.715  10.425  -15.948   1.118   2.683  -0.006  O5   LHT   7  
LHT  C16  C6   C  0  1  N  N  N  -12.095   8.215  -15.948   2.887   1.283  -0.346  C16  LHT   8  
LHT  C4   C7   C  0  1  N  N  S   -9.240   9.473  -16.351   0.034  -1.125   0.238  C4   LHT   9  
LHT  O4   O3   O  0  1  N  N  N  -12.616   9.430  -14.126   2.711   3.446  -1.360  O4   LHT  10  
LHT  C3   C8   C  0  1  N  N  N  -11.250   7.950  -16.930   2.395   0.253   0.367  C3   LHT  11  
LHT  C2   C9   C  0  1  N  N  R  -10.991   6.468  -16.965   3.412  -0.866   0.373  C2   LHT  12  
LHT  C15  C10  C  0  1  N  N  N   -7.731   9.282  -16.476  -1.429  -1.339   0.709  C15  LHT  13  
LHT  C1   C11  C  0  1  N  N  N  -10.681   5.794  -18.273   3.863  -1.169   1.804  C1   LHT  14  
LHT  C12  C12  C  0  1  Y  N  N   -7.538  15.714  -18.223  -7.279   0.499   0.317  C12  LHT  15  
LHT  C19  C13  C  0  1  N  N  S  -13.361   5.413  -16.839   5.858  -0.251   0.394  C19  LHT  16  
LHT  C10  C14  C  0  1  Y  N  N   -5.472  15.961  -17.031  -8.123  -1.575  -0.558  C10  LHT  17  
LHT  C21  C15  C  0  1  N  N  R  -13.686   3.933  -16.652   6.492  -1.641   0.482  C21  LHT  18  
LHT  C22  C16  C  0  1  N  N  N  -12.691   3.018  -17.297   7.575  -1.776  -0.590  C22  LHT  19  
LHT  C20  C17  C  0  1  N  N  N  -14.589   6.137  -16.298   6.833   0.707  -0.238  C20  LHT  20  
LHT  C7   C18  C  0  1  N  N  N   -6.636  11.555  -16.477  -3.506  -1.402  -0.678  C7   LHT  21  
LHT  C8   C19  C  0  1  Y  N  N   -6.791  14.006  -16.708  -5.791  -1.362  -0.014  C8   LHT  22  
LHT  C9   C20  C  0  1  Y  N  N   -5.657  14.750  -16.410  -6.855  -2.122  -0.486  C9   LHT  23  
LHT  C13  C21  C  0  1  N  N  N   -8.505  16.228  -19.222  -7.509   1.896   0.742  C13  LHT  24  
LHT  C14  C22  C  0  1  Y  N  N   -7.722  14.488  -17.621  -6.001  -0.055   0.396  C14  LHT  25  
LHT  O7   O4   O  0  1  N  N  N  -15.158   6.935  -17.008   7.304   0.462  -1.324  O7   LHT  26  
LHT  S1   S1   S  0  1  N  N  N  -10.274   9.099  -17.795   0.825   0.215   1.164  S1   LHT  27  
LHT  N1   N1   N  0  1  N  N  N   -8.323  10.868  -14.901  -1.299  -1.562  -1.707  N1   LHT  28  
LHT  O1   O5   O  0  1  N  N  N   -5.983  11.353  -17.483  -3.728  -0.496  -1.454  O1   LHT  29  
LHT  N2   N2   N  0  1  N  N  N   -6.960  12.786  -16.028  -4.510  -1.921   0.057  N2   LHT  30  
LHT  O2   O6   O  0  1  N  N  N   -8.274  17.174  -19.900  -6.584   2.563   1.159  O2   LHT  31  
LHT  O3   O7   O  0  1  N  N  N   -9.585  15.570  -19.324  -8.744   2.428   0.666  O3   LHT  32  
LHT  N3   N3   N  0  1  N  N  N  -12.385   7.102  -15.378   4.167   1.024  -0.863  N3   LHT  33  
LHT  O8   O8   O  0  1  N  N  N  -13.891   3.628  -15.277   7.077  -1.816   1.774  O8   LHT  34  
LHT  H1   H1   H  0  1  N  N  N   -6.225  17.381  -18.439  -9.332   0.153  -0.221  H1   LHT  35  
LHT  H2   H2   H  0  1  N  N  N  -11.713   5.103  -15.477   4.755  -0.949  -1.334  H2   LHT  36  
LHT  H3   H3   H  0  1  N  N  N   -6.370  10.041  -14.950  -2.141  -3.032  -0.448  H3   LHT  37  
LHT  H4   H4   H  0  1  N  N  N  -15.533   6.496  -14.868   7.749   2.453  -0.071  H4   LHT  38  
LHT  H5   H5   H  0  1  N  N  N   -9.216  11.610  -16.679  -0.420   0.329  -1.325  H5   LHT  39  
LHT  H6   H6   H  0  1  N  N  N  -10.373  11.062  -15.419   0.727  -0.949  -1.825  H6   LHT  40  
LHT  H7   H7   H  0  1  N  N  N   -9.602   8.800  -15.560   0.610  -2.046   0.321  H7   LHT  41  
LHT  H8   H8   H  0  1  N  N  N  -12.866  10.285  -13.795   2.162   4.238  -1.440  H8   LHT  42  
LHT  H9   H9   H  0  1  N  N  N  -10.085   6.328  -16.357   2.997  -1.759  -0.093  H9   LHT  43  
LHT  H10  H10  H  0  1  N  N  N   -7.425   8.301  -16.083  -1.891  -0.388   0.975  H10  LHT  44  
LHT  H11  H11  H  0  1  N  N  N   -7.409   9.374  -17.524  -1.466  -2.035   1.546  H11  LHT  45  
LHT  H12  H12  H  0  1  N  N  N  -10.522   4.719  -18.103   3.217  -1.935   2.234  H12  LHT  46  
LHT  H13  H13  H  0  1  N  N  N  -11.523   5.935  -18.967   4.893  -1.527   1.792  H13  LHT  47  
LHT  H14  H14  H  0  1  N  N  N   -9.771   6.235  -18.706   3.801  -0.262   2.405  H14  LHT  48  
LHT  H15  H15  H  0  1  N  N  N  -13.270   5.623  -17.915   5.604   0.096   1.396  H15  LHT  49  
LHT  H16  H16  H  0  1  N  N  N   -4.594  16.548  -16.805  -8.946  -2.170  -0.925  H16  LHT  50  
LHT  H17  H17  H  0  1  N  N  N  -14.642   3.764  -17.169   5.727  -2.401   0.323  H17  LHT  51  
LHT  H18  H18  H  0  1  N  N  N  -12.987   1.973  -17.123   8.341  -1.016  -0.431  H18  LHT  52  
LHT  H19  H19  H  0  1  N  N  N  -12.660   3.215  -18.379   8.027  -2.765  -0.527  H19  LHT  53  
LHT  H20  H20  H  0  1  N  N  N  -11.696   3.195  -16.863   7.129  -1.641  -1.576  H20  LHT  54  
LHT  H21  H21  H  0  1  N  N  N   -4.931  14.382  -15.700  -6.691  -3.143  -0.796  H21  LHT  55  
LHT  H22  H22  H  0  1  N  N  N   -8.595  13.898  -17.860  -5.176   0.536   0.766  H22  LHT  56  
LHT  H23  H23  H  0  1  N  N  N   -8.176  11.786  -14.532  -1.858  -1.069  -2.387  H23  LHT  57  
LHT  H25  H25  H  0  1  N  N  N   -7.363  12.836  -15.114  -4.344  -2.681   0.635  H25  LHT  58  
LHT  H26  H26  H  0  1  N  N  N  -10.129  15.957  -20.000  -8.845   3.345   0.955  H26  LHT  59  
LHT  H27  H27  H  0  1  N  N  N  -13.364   7.110  -15.175   4.690   1.638  -1.401  H27  LHT  60  
LHT  H28  H28  H  0  1  N  N  N  -14.527   4.231  -14.910   7.608  -1.065   2.072  H28  LHT  61  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LHT  O2   C13  DOUB  N  N   1  
LHT  O3   C13  SING  N  N   2  
LHT  C13  C12  SING  N  N   3  
LHT  C1   C2   SING  N  N   4  
LHT  C12  C11  DOUB  Y  N   5  
LHT  C12  C14  SING  Y  N   6  
LHT  C11  C10  SING  Y  N   7  
LHT  S1   C3   SING  N  N   8  
LHT  S1   C4   SING  N  N   9  
LHT  C14  C8   DOUB  Y  N  10  
LHT  O1   C7   DOUB  N  N  11  
LHT  C22  C21  SING  N  N  12  
LHT  C10  C9   DOUB  Y  N  13  
LHT  O7   C20  DOUB  N  N  14  
LHT  C2   C3   SING  N  N  15  
LHT  C2   C18  SING  N  N  16  
LHT  C3   C16  DOUB  N  N  17  
LHT  C19  C21  SING  N  N  18  
LHT  C19  C20  SING  N  N  19  
LHT  C19  C18  SING  N  N  20  
LHT  C8   C9   SING  Y  N  21  
LHT  C8   N2   SING  N  N  22  
LHT  C21  O8   SING  N  N  23  
LHT  C7   N2   SING  N  N  24  
LHT  C7   C6   SING  N  N  25  
LHT  C15  C4   SING  N  N  26  
LHT  C15  C6   SING  N  N  27  
LHT  C4   C5   SING  N  N  28  
LHT  C20  O6   SING  N  N  29  
LHT  C18  N3   SING  N  N  30  
LHT  C16  N3   SING  N  N  31  
LHT  C16  C17  SING  N  N  32  
LHT  O5   C17  DOUB  N  N  33  
LHT  C5   N1   SING  N  N  34  
LHT  C6   N1   SING  N  N  35  
LHT  C17  O4   SING  N  N  36  
LHT  C11  H1   SING  N  N  37  
LHT  C18  H2   SING  N  N  38  
LHT  C6   H3   SING  N  N  39  
LHT  O6   H4   SING  N  N  40  
LHT  C5   H5   SING  N  N  41  
LHT  C5   H6   SING  N  N  42  
LHT  C4   H7   SING  N  N  43  
LHT  O4   H8   SING  N  N  44  
LHT  C2   H9   SING  N  N  45  
LHT  C15  H10  SING  N  N  46  
LHT  C15  H11  SING  N  N  47  
LHT  C1   H12  SING  N  N  48  
LHT  C1   H13  SING  N  N  49  
LHT  C1   H14  SING  N  N  50  
LHT  C19  H15  SING  N  N  51  
LHT  C10  H16  SING  N  N  52  
LHT  C21  H17  SING  N  N  53  
LHT  C22  H18  SING  N  N  54  
LHT  C22  H19  SING  N  N  55  
LHT  C22  H20  SING  N  N  56  
LHT  C9   H21  SING  N  N  57  
LHT  C14  H22  SING  N  N  58  
LHT  N1   H23  SING  N  N  59  
LHT  N2   H25  SING  N  N  60  
LHT  O3   H26  SING  N  N  61  
LHT  N3   H27  SING  N  N  62  
LHT  O8   H28  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LHT  InChI             InChI                 1.03   "InChI=1S/C22H27N3O8S/c1-9-16(15(10(2)26)21(30)31)25-17(22(32)33)18(9)34-13-7-14(23-8-13)19(27)24-12-5-3-4-11(6-12)20(28)29/h3-6,9-10,13-16,23,25-26H,7-8H2,1-2H3,(H,24,27)(H,28,29)(H,30,31)(H,32,33)/t9-,10-,13+,14+,15-,16-/m1/s1"  
LHT  InChIKey          InChI                 1.03   LMDXYCKWMWUYCV-ANEDZVCMSA-N  
LHT  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H](O)[C@H]([C@@H]1NC(=C(S[C@@H]2CN[C@@H](C2)C(=O)Nc3cccc(c3)C(O)=O)[C@@H]1C)C(O)=O)C(O)=O"  
LHT  SMILES            CACTVS                3.385  "C[CH](O)[CH]([CH]1NC(=C(S[CH]2CN[CH](C2)C(=O)Nc3cccc(c3)C(O)=O)[CH]1C)C(O)=O)C(O)=O"  
LHT  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1[C@@H](NC(=C1S[C@H]2C[C@H](NC2)C(=O)Nc3cccc(c3)C(=O)O)C(=O)O)[C@@H]([C@@H](C)O)C(=O)O"  
LHT  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1C(NC(=C1SC2CC(NC2)C(=O)Nc3cccc(c3)C(=O)O)C(=O)O)C(C(C)O)C(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          LHT
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{S},3~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-2,3-dihydro-1~{H}-pyrrole-5-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LHT  "Create component"  2019-08-19  EBI   
LHT  "Initial release"   2020-04-01  RCSB  
##
