data_O2T
# 
_chem_comp.id                                    O2T 
_chem_comp.name                                  "[2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[1,1,2-tris(oxidanyl)-2-oxidanylidene-ethyl]-1,3-thiazol-3-ium-5-yl]ethoxy-oxidanyl-phosphoryl] hydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H20 N4 O11 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-11-24 
_chem_comp.pdbx_modified_date                    2015-12-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        514.341 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     O2T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EXD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
O2T C1  C1  C 0  1 N N N 25.135 97.513  24.215 -3.724 -0.402 1.590  C1  O2T 1  
O2T C3  C2  C 0  1 Y N N 23.638 97.714  24.032 -3.922 -1.540 0.623  C3  O2T 2  
O2T C4  C3  C 0  1 Y N N 22.809 97.611  25.141 -4.823 -1.435 -0.419 C4  O2T 3  
O2T N5  N1  N 0  1 Y N N 21.491 97.776  25.006 -4.970 -2.457 -1.251 N5  O2T 4  
O2T C6  C4  C 0  1 Y N N 20.944 98.041  23.803 -4.273 -3.564 -1.098 C6  O2T 5  
O2T N7  N2  N 0  1 Y N N 21.723 98.140  22.706 -3.404 -3.708 -0.118 N7  O2T 6  
O2T C8  C5  C 0  1 Y N N 23.058 97.977  22.798 -3.195 -2.726 0.754  C8  O2T 7  
O2T N9  N3  N 0  1 N N N 23.877 98.098  21.566 -2.280 -2.880 1.783  N9  O2T 8  
O2T C10 C6  C 0  1 N N N 19.455 98.222  23.686 -4.476 -4.698 -2.069 C10 O2T 9  
O2T N11 N4  N 1  1 Y N N 25.711 96.519  23.274 -2.656 0.474  1.102  N11 O2T 10 
O2T C12 C7  C 0  1 Y N N 26.600 96.881  22.318 -2.889 1.399  0.234  C12 O2T 11 
O2T S13 S1  S 0  1 Y N N 27.117 95.471  21.345 -1.448 2.248  -0.124 S13 O2T 12 
O2T C14 C8  C 0  1 Y N N 26.038 94.406  22.356 -0.557 1.227  1.002  C14 O2T 13 
O2T C15 C9  C 0  1 Y N N 25.392 95.133  23.305 -1.417 0.354  1.535  C15 O2T 14 
O2T C19 C10 C 0  1 N N N 25.943 92.937  22.074 0.915  1.321  1.310  C19 O2T 15 
O2T C20 C11 C 0  1 N N N 27.071 92.157  22.728 1.696  0.424  0.348  C20 O2T 16 
O2T O21 O1  O 0  1 N N N 26.664 90.805  22.965 3.092  0.513  0.640  O21 O2T 17 
O2T P22 P1  P 0  1 N N N 25.992 89.825  21.869 4.213  -0.302 -0.180 P22 O2T 18 
O2T O23 O2  O 0  1 N N N 26.871 90.075  20.540 5.675  0.137  0.330  O23 O2T 19 
O2T P24 P2  P 0  1 N N N 28.413 89.637  20.372 7.155  0.040  -0.298 P24 O2T 20 
O2T O25 O3  O 0  1 N N N 26.203 88.402  22.325 4.012  -1.881 0.062  O25 O2T 21 
O2T O27 O4  O 0  1 N N N 24.576 90.273  21.591 4.083  -0.003 -1.623 O27 O2T 22 
O2T O28 O5  O 0  1 N N N 28.460 88.187  20.780 8.247  0.166  0.878  O28 O2T 23 
O2T O29 O6  O 0  1 N N N 28.651 89.868  18.903 7.322  -1.320 -1.013 O29 O2T 24 
O2T O30 O7  O -1 1 N N N 29.205 90.551  21.272 7.359  1.185  -1.315 O30 O2T 25 
O2T C2  C12 C 0  1 N N N 24.430 94.598  24.323 -1.006 -0.678 2.553  C2  O2T 26 
O2T C16 C13 C 0  1 N N N 27.179 98.258  21.990 -4.235 1.690  -0.377 C16 O2T 27 
O2T O17 O8  O 0  1 N N N 28.047 97.937  20.898 -4.442 0.836  -1.505 O17 O2T 28 
O2T O18 O9  O 0  1 N N N 26.032 99.009  21.625 -5.259 1.454  0.592  O18 O2T 29 
O2T C5  C14 C 0  1 N N N 28.125 98.851  23.116 -4.286 3.129  -0.821 C5  O2T 30 
O2T O6  O10 O 0  1 N N N 27.641 99.745  23.894 -4.017 4.111  0.054  O6  O2T 31 
O2T O7  O11 O 0  1 N N N 29.310 98.366  23.148 -4.567 3.400  -1.964 O7  O2T 32 
O2T H1  H1  H 0  1 N N N 25.318 97.168  25.243 -4.650 0.167  1.676  H1  O2T 33 
O2T H2  H2  H 0  1 N N N 25.639 98.478  24.056 -3.450 -0.799 2.568  H2  O2T 34 
O2T H3  H3  H 0  1 N N N 23.230 97.398  26.112 -5.400 -0.533 -0.553 H3  O2T 35 
O2T H4  H4  H 0  1 N N N 23.282 98.297  20.788 -1.584 -3.552 1.715  H4  O2T 36 
O2T H5  H5  H 0  1 N N N 24.539 98.839  21.677 -2.336 -2.316 2.570  H5  O2T 37 
O2T H6  H6  H 0  1 N N N 19.191 98.426  22.638 -3.785 -4.589 -2.905 H6  O2T 38 
O2T H7  H7  H 0  1 N N N 18.947 97.305  24.020 -4.289 -5.646 -1.565 H7  O2T 39 
O2T H8  H8  H 0  1 N N N 19.138 99.067  24.315 -5.501 -4.679 -2.441 H8  O2T 40 
O2T H9  H9  H 0  1 N N N 24.983 92.563  22.459 1.245  2.353  1.193  H9  O2T 41 
O2T H10 H10 H 0  1 N N N 25.988 92.781  20.986 1.094  0.997  2.335  H10 O2T 42 
O2T H11 H11 H 0  1 N N N 27.948 92.161  22.064 1.365  -0.609 0.465  H11 O2T 43 
O2T H12 H12 H 0  1 N N N 27.333 92.631  23.686 1.517  0.748  -0.677 H12 O2T 44 
O2T H13 H13 H 0  1 N N N 25.365 87.958  22.377 4.084  -2.149 0.988  H13 O2T 45 
O2T H14 H14 H 0  1 N N N 28.637 87.649  20.018 9.162  0.115  0.572  H14 O2T 46 
O2T H16 H16 H 0  1 N N N 24.980 94.303  25.229 -0.691 -1.588 2.042  H16 O2T 47 
O2T H17 H17 H 0  1 N N N 23.695 95.376  24.577 -0.179 -0.291 3.149  H17 O2T 48 
O2T H18 H18 H 0  1 N N N 23.908 93.722  23.910 -1.850 -0.902 3.206  H18 O2T 49 
O2T H19 H19 H 0  1 N N N 28.948 97.938  21.198 -3.782 0.943  -2.204 H19 O2T 50 
O2T H20 H20 H 0  1 N N N 25.507 99.183  22.398 -5.228 2.054  1.350  H20 O2T 51 
O2T H21 H21 H 0  1 N N N 28.303 100.011 24.522 -4.062 5.019  -0.277 H21 O2T 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
O2T O29 P24 DOUB N N 1  
O2T P24 O23 SING N N 2  
O2T P24 O28 SING N N 3  
O2T P24 O30 SING N N 4  
O2T O23 P22 SING N N 5  
O2T O17 C16 SING N N 6  
O2T S13 C12 SING Y N 7  
O2T S13 C14 SING Y N 8  
O2T N9  C8  SING N N 9  
O2T O27 P22 DOUB N N 10 
O2T O18 C16 SING N N 11 
O2T P22 O25 SING N N 12 
O2T P22 O21 SING N N 13 
O2T C16 C12 SING N N 14 
O2T C16 C5  SING N N 15 
O2T C19 C14 SING N N 16 
O2T C19 C20 SING N N 17 
O2T C12 N11 DOUB Y N 18 
O2T C14 C15 DOUB Y N 19 
O2T N7  C8  DOUB Y N 20 
O2T N7  C6  SING Y N 21 
O2T C20 O21 SING N N 22 
O2T C8  C3  SING Y N 23 
O2T C5  O7  DOUB N N 24 
O2T C5  O6  SING N N 25 
O2T N11 C15 SING Y N 26 
O2T N11 C1  SING N N 27 
O2T C15 C2  SING N N 28 
O2T C10 C6  SING N N 29 
O2T C6  N5  DOUB Y N 30 
O2T C3  C1  SING N N 31 
O2T C3  C4  DOUB Y N 32 
O2T N5  C4  SING Y N 33 
O2T C1  H1  SING N N 34 
O2T C1  H2  SING N N 35 
O2T C4  H3  SING N N 36 
O2T N9  H4  SING N N 37 
O2T N9  H5  SING N N 38 
O2T C10 H6  SING N N 39 
O2T C10 H7  SING N N 40 
O2T C10 H8  SING N N 41 
O2T C19 H9  SING N N 42 
O2T C19 H10 SING N N 43 
O2T C20 H11 SING N N 44 
O2T C20 H12 SING N N 45 
O2T O25 H13 SING N N 46 
O2T O28 H14 SING N N 47 
O2T C2  H16 SING N N 48 
O2T C2  H17 SING N N 49 
O2T C2  H18 SING N N 50 
O2T O17 H19 SING N N 51 
O2T O18 H20 SING N N 52 
O2T O6  H21 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
O2T InChI            InChI                1.03  "InChI=1S/C14H20N4O11P2S/c1-7-10(3-4-28-31(26,27)29-30(23,24)25)32-12(14(21,22)13(19)20)18(7)6-9-5-16-8(2)17-11(9)15/h5,21-22H,3-4,6H2,1-2H3,(H5-,15,16,17,19,20,23,24,25,26,27)" 
O2T InChIKey         InChI                1.03  DVVUFOVKVOOQQB-UHFFFAOYSA-N                                                                                                                                                       
O2T SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)([O-])=O)sc2C(O)(O)C(O)=O)c(N)n1"                                                                                                         
O2T SMILES           CACTVS               3.385 "Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)([O-])=O)sc2C(O)(O)C(O)=O)c(N)n1"                                                                                                         
O2T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "Cc1c(sc([n+]1Cc2cnc(nc2N)C)C(C(=O)O)(O)O)CCOP(=O)(O)OP(=O)(O)[O-]"                                                                                                               
O2T SMILES           "OpenEye OEToolkits" 2.0.4 "Cc1c(sc([n+]1Cc2cnc(nc2N)C)C(C(=O)O)(O)O)CCOP(=O)(O)OP(=O)(O)[O-]"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
O2T "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "[2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[1,1,2-tris(oxidanyl)-2-oxidanylidene-ethyl]-1,3-thiazol-3-ium-5-yl]ethoxy-oxidanyl-phosphoryl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
O2T "Create component" 2015-11-24 RCSB 
O2T "Initial release"  2015-12-29 RCSB 
# 
