data_RHT
#

_chem_comp.id                                   RHT
_chem_comp.name                                 "4-(3-methylbenzimidazol-5-yl)pyridine-2,6-diamine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H13 N5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-09-30
_chem_comp.pdbx_modified_date                   2021-05-21
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       239.276
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RHT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7AJ7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RHT  C1   C1   C  0  1  N  N  N  44.105  2.385  16.082   3.655   2.457   0.003  C1   RHT   1  
RHT  N1   N1   N  0  1  Y  N  N  44.153  3.806  16.375   3.578   0.994   0.000  N1   RHT   2  
RHT  C2   C2   C  0  1  Y  N  N  44.537  4.414  17.522   4.630   0.132  -0.004  C2   RHT   3  
RHT  N2   N2   N  0  1  Y  N  N  44.444  5.723  17.497   4.201  -1.097  -0.005  N2   RHT   4  
RHT  C3   C3   C  0  1  Y  N  N  43.968  6.000  16.221   2.844  -1.107  -0.003  C3   RHT   5  
RHT  N3   N3   N  0  1  N  N  N  41.711  3.767   9.350  -4.571  -1.867   0.001  N3   RHT   6  
RHT  C4   C4   C  0  1  Y  N  N  43.667  7.209  15.602   1.890  -2.131  -0.002  C4   RHT   7  
RHT  N4   N4   N  0  1  Y  N  N  41.208  5.988   9.650  -3.995   0.408  -0.002  N4   RHT   8  
RHT  C5   C5   C  0  1  Y  N  N  43.193  7.182  14.305   0.561  -1.826   0.001  C5   RHT   9  
RHT  N5   N5   N  0  1  N  N  N  40.656  8.212   9.902  -3.572   2.717  -0.004  N5   RHT  10  
RHT  C6   C6   C  0  1  Y  N  N  43.011  5.981  13.571   0.138  -0.493   0.004  C6   RHT  11  
RHT  C7   C7   C  0  1  Y  N  N  43.302  4.783  14.221   1.072   0.537   0.004  C7   RHT  12  
RHT  C8   C8   C  0  1  Y  N  N  43.783  4.810  15.519   2.424   0.235   0.007  C8   RHT  13  
RHT  C9   C9   C  0  1  Y  N  N  42.429  5.988  12.192  -1.311  -0.177   0.002  C9   RHT  14  
RHT  C10  C10  C  0  1  Y  N  N  42.367  4.830  11.406  -2.266  -1.196   0.002  C10  RHT  15  
RHT  C11  C11  C  0  1  Y  N  N  41.767  4.862  10.130  -3.612  -0.860   0.000  C11  RHT  16  
RHT  C12  C12  C  0  1  Y  N  N  41.228  7.105  10.409  -3.119   1.403  -0.002  C12  RHT  17  
RHT  C13  C13  C  0  1  Y  N  N  41.809  7.129  11.690  -1.755   1.148  -0.000  C13  RHT  18  
RHT  H1   H1   H  0  1  N  N  N  44.462  1.818  16.954   3.671   2.822  -1.024  H1   RHT  19  
RHT  H2   H2   H  0  1  N  N  N  43.070  2.093  15.853   2.786   2.866   0.519  H2   RHT  20  
RHT  H3   H3   H  0  1  N  N  N  44.747  2.167  15.216   4.564   2.773   0.515  H3   RHT  21  
RHT  H4   H4   H  0  1  N  N  N  44.890  3.868  18.385   5.669   0.424  -0.006  H4   RHT  22  
RHT  H5   H5   H  0  1  N  N  N  41.237  3.988   8.498  -5.514  -1.639  -0.001  H5   RHT  23  
RHT  H6   H6   H  0  1  N  N  N  42.639  3.457   9.144  -4.297  -2.798   0.002  H6   RHT  24  
RHT  H7   H7   H  0  1  N  N  N  43.801  8.146  16.123   2.207  -3.163  -0.005  H7   RHT  25  
RHT  H8   H8   H  0  1  N  N  N  42.949  8.119  13.827  -0.170  -2.620   0.001  H8   RHT  26  
RHT  H9   H9   H  0  1  N  N  N  40.289  8.012   8.993  -4.524   2.902  -0.005  H9   RHT  27  
RHT  H10  H10  H  0  1  N  N  N  39.914  8.509  10.503  -2.936   3.449  -0.004  H10  RHT  28  
RHT  H11  H11  H  0  1  N  N  N  43.153  3.840  13.716   0.746   1.567   0.007  H11  RHT  29  
RHT  H12  H12  H  0  1  N  N  N  42.782  3.906  11.780  -1.960  -2.232   0.003  H12  RHT  30  
RHT  H13  H13  H  0  1  N  N  N  41.774  8.031  12.283  -1.046   1.962  -0.000  H13  RHT  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RHT  N3   C11  SING  N  N   1  
RHT  N4   C11  DOUB  Y  N   2  
RHT  N4   C12  SING  Y  N   3  
RHT  N5   C12  SING  N  N   4  
RHT  C11  C10  SING  Y  N   5  
RHT  C12  C13  DOUB  Y  N   6  
RHT  C10  C9   DOUB  Y  N   7  
RHT  C13  C9   SING  Y  N   8  
RHT  C9   C6   SING  N  N   9  
RHT  C6   C7   DOUB  Y  N  10  
RHT  C6   C5   SING  Y  N  11  
RHT  C7   C8   SING  Y  N  12  
RHT  C5   C4   DOUB  Y  N  13  
RHT  C8   C3   DOUB  Y  N  14  
RHT  C8   N1   SING  Y  N  15  
RHT  C4   C3   SING  Y  N  16  
RHT  C1   N1   SING  N  N  17  
RHT  C3   N2   SING  Y  N  18  
RHT  N1   C2   SING  Y  N  19  
RHT  N2   C2   DOUB  Y  N  20  
RHT  C1   H1   SING  N  N  21  
RHT  C1   H2   SING  N  N  22  
RHT  C1   H3   SING  N  N  23  
RHT  C2   H4   SING  N  N  24  
RHT  N3   H5   SING  N  N  25  
RHT  N3   H6   SING  N  N  26  
RHT  C4   H7   SING  N  N  27  
RHT  C5   H8   SING  N  N  28  
RHT  N5   H9   SING  N  N  29  
RHT  N5   H10  SING  N  N  30  
RHT  C7   H11  SING  N  N  31  
RHT  C10  H12  SING  N  N  32  
RHT  C13  H13  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RHT  InChI             InChI                 1.03   "InChI=1S/C13H13N5/c1-18-7-16-10-3-2-8(4-11(10)18)9-5-12(14)17-13(15)6-9/h2-7H,1H3,(H4,14,15,17)"  
RHT  InChIKey          InChI                 1.03   SOLATORCLYYKKR-UHFFFAOYSA-N  
RHT  SMILES_CANONICAL  CACTVS                3.385  "Cn1cnc2ccc(cc12)c3cc(N)nc(N)c3"  
RHT  SMILES            CACTVS                3.385  "Cn1cnc2ccc(cc12)c3cc(N)nc(N)c3"  
RHT  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cn1cnc2c1cc(cc2)c3cc(nc(c3)N)N"  
RHT  SMILES            "OpenEye OEToolkits"  2.0.7  "Cn1cnc2c1cc(cc2)c3cc(nc(c3)N)N"  
#
_pdbx_chem_comp_identifier.comp_id          RHT
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-(3-methylbenzimidazol-5-yl)pyridine-2,6-diamine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RHT  "Create component"  2020-09-30  PDBE  
RHT  "Initial release"   2021-05-26  RCSB  
##
