data_EBV
# 
_chem_comp.id                                    EBV 
_chem_comp.name                                  "(2S)-2-amino-1-[(3aR,6aS)-5-[(5-chloro-1H-indol-3-yl)methyl]hexahydropyrrolo[3,4-c]pyrrol-2(1H)-yl]-3-(1H-indol-3-yl)propan-1-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H28 Cl N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-19 
_chem_comp.pdbx_modified_date                    2018-10-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.986 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     EBV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BVM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
EBV N1  N1  N  0 1 Y N N 38.133 32.444 20.074 6.113  -2.692 0.699  N1  EBV 1  
EBV N3  N2  N  0 1 N N N 35.951 28.824 20.564 -2.455 -0.076 -0.190 N3  EBV 2  
EBV C4  C1  C  0 1 Y N N 37.738 32.872 21.344 7.180  -1.832 0.567  C4  EBV 3  
EBV C5  C2  C  0 1 Y N N 36.516 33.414 21.783 8.557  -2.018 0.501  C5  EBV 4  
EBV C6  C3  C  0 1 Y N N 36.420 33.749 23.120 9.389  -0.929 0.363  C6  EBV 5  
EBV C7  C4  C  0 1 Y N N 37.495 33.558 24.013 8.867  0.356  0.291  C7  EBV 6  
EBV C8  C5  C  0 1 Y N N 38.703 33.024 23.585 7.518  0.561  0.355  C8  EBV 7  
EBV C10 C6  C  0 1 N N N 40.803 29.280 22.212 2.751  1.818  -0.922 C10 EBV 8  
EBV C13 C7  C  0 1 N N N 37.057 29.026 19.564 -1.886 1.281  -0.001 C13 EBV 9  
EBV C15 C8  C  0 1 Y N N 34.410 29.976 22.108 -4.298 0.137  1.380  C15 EBV 10 
EBV C17 C9  C  0 1 Y N N 33.128 30.051 24.017 -6.495 0.798  1.391  C17 EBV 11 
EBV C20 C10 C  0 1 Y N N 35.097 30.880 25.665 -7.419 -1.029 -0.486 C20 EBV 12 
EBV C21 C11 C  0 1 Y N N 35.437 30.708 24.352 -6.095 -1.038 -0.145 C21 EBV 13 
EBV C22 C12 C  0 1 Y N N 34.436 30.281 23.498 -5.615 -0.126 0.797  C22 EBV 14 
EBV C24 C13 C  0 1 N N R 37.780 27.275 21.170 -0.331 0.005  -1.363 C24 EBV 15 
EBV N   N3  N  0 1 N N N 42.015 30.301 20.169 5.047  1.333  -1.554 N   EBV 16 
EBV C   C14 C  0 1 N N S 41.769 30.367 21.626 3.853  0.790  -0.892 C   EBV 17 
EBV O   O1  O  0 1 N N N 40.903 29.016 23.419 3.018  2.988  -1.098 O   EBV 18 
EBV C1  C15 C  0 1 N N N 41.243 31.777 22.033 4.188  0.444  0.560  C1  EBV 19 
EBV C11 C16 C  0 1 N N N 39.546 28.574 20.022 0.278  2.304  -0.753 C11 EBV 20 
EBV C12 C17 C  0 1 N N S 38.137 27.970 19.832 -0.914 1.439  -1.195 C12 EBV 21 
EBV C14 C18 C  0 1 N N N 35.561 30.133 21.184 -3.017 -0.592 1.066  C14 EBV 22 
EBV C16 C19 C  0 1 Y N N 33.130 29.561 21.801 -4.446 1.155  2.243  C16 EBV 23 
EBV C18 C20 C  0 1 Y N N 32.803 30.257 25.374 -7.838 0.790  1.029  C18 EBV 24 
EBV C19 C21 C  0 1 Y N N 33.814 30.685 26.210 -8.291 -0.119 0.098  C19 EBV 25 
EBV C2  C22 C  0 1 Y N N 39.917 32.111 21.455 5.202  -0.671 0.590  C2  EBV 26 
EBV C23 C23 C  0 1 N N N 36.376 27.791 21.578 -1.335 -0.921 -0.656 C23 EBV 27 
EBV C25 C24 C  0 1 N N N 38.890 27.646 22.190 0.970  0.062  -0.528 C25 EBV 28 
EBV C3  C25 C  0 1 Y N N 39.461 31.983 20.153 4.943  -1.982 0.711  C3  EBV 29 
EBV C9  C26 C  0 1 Y N N 38.838 32.673 22.233 6.656  -0.529 0.493  C9  EBV 30 
EBV N2  N4  N  0 1 N N N 39.835 28.556 21.476 1.470  1.437  -0.752 N2  EBV 31 
EBV N4  N5  N  0 1 Y N N 32.338 29.608 22.965 -5.751 1.565  2.260  N4  EBV 32 
EBV CL  CL1 CL 0 0 N N N 36.375 31.300 26.728 -8.015 -2.163 -1.657 CL  EBV 33 
EBV H1  H1  H  0 1 N N N 37.568 32.462 19.249 6.180  -3.657 0.769  H1  EBV 34 
EBV H3  H3  H  0 1 N N N 35.689 33.562 21.104 8.973  -3.014 0.557  H3  EBV 35 
EBV H4  H4  H  0 1 N N N 35.497 34.169 23.491 10.458 -1.075 0.312  H4  EBV 36 
EBV H5  H5  H  0 1 N N N 37.376 33.833 25.051 9.533  1.199  0.184  H5  EBV 37 
EBV H6  H6  H  0 1 N N N 39.520 32.882 24.277 7.119  1.563  0.298  H6  EBV 38 
EBV H7  H7  H  0 1 N N N 37.484 30.033 19.678 -2.672 2.036  -0.044 H7  EBV 39 
EBV H8  H8  H  0 1 N N N 36.664 28.907 18.544 -1.346 1.342  0.944  H8  EBV 40 
EBV H9  H9  H  0 1 N N N 36.440 30.897 23.998 -5.423 -1.749 -0.602 H9  EBV 41 
EBV H10 H10 H  0 1 N N N 37.751 26.184 21.029 -0.156 -0.276 -2.401 H10 EBV 42 
EBV H11 H11 H  0 1 N N N 42.351 29.391 19.928 5.371  2.168  -1.088 H11 EBV 43 
EBV H12 H12 H  0 1 N N N 41.162 30.482 19.679 5.779  0.640  -1.604 H12 EBV 44 
EBV H14 H14 H  0 1 N N N 42.736 30.233 22.133 3.526  -0.109 -1.414 H14 EBV 45 
EBV H15 H15 H  0 1 N N N 41.969 32.530 21.693 4.599  1.322  1.058  H15 EBV 46 
EBV H16 H16 H  0 1 N N N 41.163 31.814 23.129 3.282  0.125  1.076  H16 EBV 47 
EBV H17 H17 H  0 1 N N N 40.291 27.971 19.482 0.418  3.127  -1.454 H17 EBV 48 
EBV H18 H18 H  0 1 N N N 39.568 29.607 19.646 0.104  2.697  0.249  H18 EBV 49 
EBV H19 H19 H  0 1 N N N 38.152 27.230 19.018 -1.404 1.819  -2.092 H19 EBV 50 
EBV H20 H20 H  0 1 N N N 36.418 30.532 21.746 -3.221 -1.657 0.962  H20 EBV 51 
EBV H21 H21 H  0 1 N N N 35.285 30.838 20.386 -2.302 -0.436 1.874  H21 EBV 52 
EBV H22 H22 H  0 1 N N N 32.790 29.250 20.824 -3.653 1.586  2.835  H22 EBV 53 
EBV H23 H23 H  0 1 N N N 31.803 30.087 25.744 -8.524 1.493  1.478  H23 EBV 54 
EBV H24 H24 H  0 1 N N N 33.625 30.866 27.258 -9.334 -0.123 -0.181 H24 EBV 55 
EBV H25 H25 H  0 1 N N N 36.421 28.245 22.579 -0.857 -1.405 0.196  H25 EBV 56 
EBV H26 H26 H  0 1 N N N 35.659 26.957 21.586 -1.702 -1.672 -1.355 H26 EBV 57 
EBV H27 H27 H  0 1 N N N 38.452 28.159 23.059 0.756  -0.100 0.529  H27 EBV 58 
EBV H28 H28 H  0 1 N N N 39.416 26.740 22.526 1.690  -0.673 -0.888 H28 EBV 59 
EBV H29 H29 H  0 1 N N N 40.035 31.590 19.327 3.957  -2.414 0.804  H29 EBV 60 
EBV H30 H30 H  0 1 N N N 31.370 29.364 23.024 -6.102 2.286  2.806  H30 EBV 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
EBV C13 C12 SING N N 1  
EBV C13 N3  SING N N 2  
EBV C12 C11 SING N N 3  
EBV C12 C24 SING N N 4  
EBV C11 N2  SING N N 5  
EBV N1  C3  SING Y N 6  
EBV N1  C4  SING Y N 7  
EBV C3  C2  DOUB Y N 8  
EBV N   C   SING N N 9  
EBV N3  C14 SING N N 10 
EBV N3  C23 SING N N 11 
EBV C24 C23 SING N N 12 
EBV C24 C25 SING N N 13 
EBV C14 C15 SING N N 14 
EBV C4  C5  DOUB Y N 15 
EBV C4  C9  SING Y N 16 
EBV C2  C1  SING N N 17 
EBV C2  C9  SING Y N 18 
EBV N2  C25 SING N N 19 
EBV N2  C10 SING N N 20 
EBV C   C1  SING N N 21 
EBV C   C10 SING N N 22 
EBV C5  C6  SING Y N 23 
EBV C16 C15 DOUB Y N 24 
EBV C16 N4  SING Y N 25 
EBV C15 C22 SING Y N 26 
EBV C10 O   DOUB N N 27 
EBV C9  C8  DOUB Y N 28 
EBV N4  C17 SING Y N 29 
EBV C6  C7  DOUB Y N 30 
EBV C22 C17 DOUB Y N 31 
EBV C22 C21 SING Y N 32 
EBV C8  C7  SING Y N 33 
EBV C17 C18 SING Y N 34 
EBV C21 C20 DOUB Y N 35 
EBV C18 C19 DOUB Y N 36 
EBV C20 C19 SING Y N 37 
EBV C20 CL  SING N N 38 
EBV N1  H1  SING N N 39 
EBV C5  H3  SING N N 40 
EBV C6  H4  SING N N 41 
EBV C7  H5  SING N N 42 
EBV C8  H6  SING N N 43 
EBV C13 H7  SING N N 44 
EBV C13 H8  SING N N 45 
EBV C21 H9  SING N N 46 
EBV C24 H10 SING N N 47 
EBV N   H11 SING N N 48 
EBV N   H12 SING N N 49 
EBV C   H14 SING N N 50 
EBV C1  H15 SING N N 51 
EBV C1  H16 SING N N 52 
EBV C11 H17 SING N N 53 
EBV C11 H18 SING N N 54 
EBV C12 H19 SING N N 55 
EBV C14 H20 SING N N 56 
EBV C14 H21 SING N N 57 
EBV C16 H22 SING N N 58 
EBV C18 H23 SING N N 59 
EBV C19 H24 SING N N 60 
EBV C23 H25 SING N N 61 
EBV C23 H26 SING N N 62 
EBV C25 H27 SING N N 63 
EBV C25 H28 SING N N 64 
EBV C3  H29 SING N N 65 
EBV N4  H30 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
EBV SMILES           ACDLabs              12.01 "n5cc(CC(C(=O)N3CC4CN(Cc2c1c(ccc(Cl)c1)nc2)CC4C3)N)c6c5cccc6"                                                                                                                                 
EBV InChI            InChI                1.03  "InChI=1S/C26H28ClN5O/c27-20-5-6-25-22(8-20)17(10-30-25)11-31-12-18-14-32(15-19(18)13-31)26(33)23(28)7-16-9-29-24-4-2-1-3-21(16)24/h1-6,8-10,18-19,23,29-30H,7,11-15,28H2/t18-,19+,23-/m0/s1" 
EBV InChIKey         InChI                1.03  HTHTZBDFQBOXDD-YYDVJCTNSA-N                                                                                                                                                                   
EBV SMILES_CANONICAL CACTVS               3.385 "N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N3C[C@@H]4CN(C[C@@H]4C3)Cc5c[nH]c6ccc(Cl)cc56"                                                                                                                
EBV SMILES           CACTVS               3.385 "N[CH](Cc1c[nH]c2ccccc12)C(=O)N3C[CH]4CN(C[CH]4C3)Cc5c[nH]c6ccc(Cl)cc56"                                                                                                                      
EBV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)N3C[C@H]4CN(C[C@H]4C3)Cc5c[nH]c6c5cc(cc6)Cl)N"                                                                                                              
EBV SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)c(c[nH]2)CC(C(=O)N3CC4CN(CC4C3)Cc5c[nH]c6c5cc(cc6)Cl)N"                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
EBV "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-2-amino-1-[(3aR,6aS)-5-[(5-chloro-1H-indol-3-yl)methyl]hexahydropyrrolo[3,4-c]pyrrol-2(1H)-yl]-3-(1H-indol-3-yl)propan-1-one"                                           
EBV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-1-[(3~{a}~{R},6~{a}~{S})-2-[(5-chloranyl-1~{H}-indol-3-yl)methyl]-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-2-azanyl-3-(1~{H}-indol-3-yl)propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
EBV "Create component" 2017-12-19 RCSB 
EBV "Initial release"  2018-10-24 RCSB 
# 
