data_WAV
#

_chem_comp.id                                   WAV
_chem_comp.name                                 "(1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-{[2-(2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethoxy)ethyl]amino}cyclohexane-1,2,3,4-tetrol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H30 N6 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-05
_chem_comp.pdbx_modified_date                   2021-10-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       446.456
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    WAV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KBJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WAV  N1   N1   N   0  1  N  N  N  -14.087  20.932  14.099  -2.801  -0.836   0.117  N1   WAV   1  
WAV  N3   N2   N   1  1  N  N  N  -13.332  28.955  14.102   4.192  -2.273   1.073  N3   WAV   2  
WAV  C4   C1   C   0  1  N  N  R  -14.405  18.338  13.066  -5.634  -0.257  -0.085  C4   WAV   3  
WAV  C5   C2   C   0  1  N  N  S  -15.523  19.021  13.854  -5.044  -1.063   1.074  C5   WAV   4  
WAV  C6   C3   C   0  1  N  N  S  -15.429  20.549  13.642  -3.604  -0.613   1.327  C6   WAV   5  
WAV  C7   C4   C   0  1  N  N  N  -14.891  20.356   9.739  -4.165   3.170   0.877  C7   WAV   6  
WAV  C8   C5   C   0  1  N  N  N  -13.979  22.309  14.461  -2.295  -2.214   0.068  C8   WAV   7  
WAV  C10  C6   C   0  1  N  N  N  -11.184  24.674  13.628   0.546  -1.685  -2.289  C10  WAV   8  
WAV  C13  C7   C   0  1  Y  N  N  -11.563  28.166  10.755   4.065   0.646  -1.293  C13  WAV   9  
WAV  C15  C8   C   0  1  Y  N  N  -13.340  29.873  10.426   6.040   0.833   0.055  C15  WAV  10  
WAV  C17  C9   C   0  1  Y  N  N  -12.917  28.935  12.624   4.550  -1.020   0.372  C17  WAV  11  
WAV  C1   C10  C   0  1  N  N  N  -15.555  20.894  12.148  -3.590   0.876   1.681  C1   WAV  12  
WAV  C11  C11  C   0  1  N  N  N  -11.863  26.111  13.733   1.753  -0.760  -2.117  C11  WAV  13  
WAV  C12  C12  C   0  1  Y  N  N  -11.881  28.111  12.124   3.730  -0.530  -0.636  C12  WAV  14  
WAV  C14  C13  C   0  1  Y  N  N  -12.273  29.031   9.901   5.217   1.326  -0.949  C14  WAV  15  
WAV  C16  C14  C   0  1  Y  N  N  -13.634  29.820  11.736   5.704  -0.344   0.713  C16  WAV  16  
WAV  C2   C15  C   0  1  N  N  S  -14.587  20.127  11.272  -4.179   1.681   0.522  C2   WAV  17  
WAV  C3   C16  C   0  1  N  N  S  -14.553  18.594  11.571  -5.620   1.231   0.269  C3   WAV  18  
WAV  C9   C17  C   0  1  N  N  N  -12.813  22.910  13.625  -1.465  -2.407  -1.203  C9   WAV  19  
WAV  N2   N3   N   0  1  N  N  N  -11.131  27.197  13.012   2.565  -1.222  -0.989  N2   WAV  20  
WAV  N4   N4   N   0  1  N  N  N  -14.098  30.761   9.559   7.210   1.519   0.401  N4   WAV  21  
WAV  N5   N5   N   0  1  N  N  N  -15.386  31.066   9.830   7.482   2.733  -0.162  N5   WAV  22  
WAV  N6   N6   N   0  1  N  N  N  -16.282  30.736   8.790   7.715   3.741   0.860  N6   WAV  23  
WAV  O1   O1   O   0  1  N  N  N  -16.256  20.161   9.519  -4.821   3.911  -0.154  O1   WAV  24  
WAV  O2   O2   O   0  1  N  N  N  -13.333  20.604  11.517  -3.398   1.464  -0.655  O2   WAV  25  
WAV  O3   O3   O   0  1  N  N  N  -13.405  18.086  10.916  -6.170   1.984  -0.814  O3   WAV  26  
WAV  O4   O4   O   0  1  N  N  N  -14.373  16.937  13.317  -6.979  -0.678  -0.322  O4   WAV  27  
WAV  O5   O5   O   0  1  N  N  N  -15.434  18.725  15.217  -5.057  -2.453   0.743  O5   WAV  28  
WAV  O6   O6   O   0  1  N  N  N  -12.004  23.790  14.427  -0.302  -1.579  -1.144  O6   WAV  29  
WAV  O7   O7   O   0  1  N  N  N  -12.693  28.126  15.066   5.063  -3.064   1.389  O7   WAV  30  
WAV  O8   O8   O  -1  1  N  N  N  -14.368  29.834  14.522   3.027  -2.514   1.334  O8   WAV  31  
WAV  H1   H1   H   0  1  N  N  N  -13.854  20.376  14.897  -3.329  -0.615  -0.713  H1   WAV  32  
WAV  H3   H3   H   0  1  N  N  N  -13.451  18.781  13.388  -5.038  -0.423  -0.983  H3   WAV  33  
WAV  H4   H4   H   0  1  N  N  N  -16.489  18.678  13.454  -5.640  -0.898   1.971  H4   WAV  34  
WAV  H5   H5   H   0  1  N  N  N  -16.211  21.063  14.220  -3.184  -1.187   2.153  H5   WAV  35  
WAV  H6   H6   H   0  1  N  N  N  -14.313  19.640   9.136  -4.686   3.323   1.822  H6   WAV  36  
WAV  H7   H7   H   0  1  N  N  N  -14.613  21.382   9.456  -3.135   3.511   0.970  H7   WAV  37  
WAV  H8   H8   H   0  1  N  N  N  -13.760  22.401  15.535  -1.670  -2.403   0.942  H8   WAV  38  
WAV  H9   H9   H   0  1  N  N  N  -14.918  22.834  14.232  -3.134  -2.909   0.064  H9   WAV  39  
WAV  H10  H10  H   0  1  N  N  N  -11.164  24.336  12.582  -0.010  -1.395  -3.181  H10  WAV  40  
WAV  H11  H11  H   0  1  N  N  N  -10.158  24.706  14.023   0.889  -2.714  -2.393  H11  WAV  41  
WAV  H12  H12  H   0  1  N  N  N  -10.774  27.544  10.359   3.428   1.027  -2.078  H12  WAV  42  
WAV  H13  H13  H   0  1  N  N  N  -15.364  21.970  12.021  -4.185   1.041   2.579  H13  WAV  43  
WAV  H14  H14  H   0  1  N  N  N  -16.580  20.663  11.822  -2.564   1.196   1.862  H14  WAV  44  
WAV  H15  H15  H   0  1  N  N  N  -11.924  26.385  14.797   2.353  -0.773  -3.027  H15  WAV  45  
WAV  H16  H16  H   0  1  N  N  N  -12.877  26.043  13.313   1.407   0.256  -1.924  H16  WAV  46  
WAV  H17  H17  H   0  1  N  N  N  -12.025  29.071   8.851   5.478   2.240  -1.460  H17  WAV  47  
WAV  H18  H18  H   0  1  N  N  N  -14.418  30.449  12.131   6.344  -0.727   1.494  H18  WAV  48  
WAV  H19  H19  H   0  1  N  N  N  -15.475  18.125  11.197  -6.215   1.396   1.166  H19  WAV  49  
WAV  H20  H20  H   0  1  N  N  N  -13.231  23.476  12.780  -1.164  -3.452  -1.285  H20  WAV  50  
WAV  H21  H21  H   0  1  N  N  N  -12.185  22.092  13.243  -2.063  -2.133  -2.072  H21  WAV  51  
WAV  H22  H22  H   0  1  N  N  N  -10.432  26.754  12.451   2.296  -2.007  -0.487  H22  WAV  52  
WAV  H23  H23  H   0  1  N  N  N  -14.090  30.346   8.649   7.828   1.132   1.040  H23  WAV  53  
WAV  H24  H24  H   0  1  N  N  N  -15.448  32.050   9.999   6.741   3.016  -0.786  H24  WAV  54  
WAV  H25  H25  H   0  1  N  N  N  -17.212  30.988   9.058   7.916   4.638   0.444  H25  WAV  55  
WAV  H26  H26  H   0  1  N  N  N  -16.028  31.234   7.961   6.932   3.803   1.492  H26  WAV  56  
WAV  H27  H27  H   0  1  N  N  N  -16.451  20.296   8.599  -4.850   4.865   0.004  H27  WAV  57  
WAV  H28  H28  H   0  1  N  N  N  -13.120  20.480  12.435  -3.715   1.946  -1.431  H28  WAV  58  
WAV  H29  H29  H   0  1  N  N  N  -13.340  17.151  11.069  -7.084   1.750  -1.030  H29  WAV  59  
WAV  H30  H30  H   0  1  N  N  N  -14.281  16.784  14.250  -7.063  -1.613  -0.553  H30  WAV  60  
WAV  H31  H31  H   0  1  N  N  N  -16.138  19.160  15.683  -5.940  -2.808   0.569  H31  WAV  61  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WAV  N6   N5   SING  N  N   1  
WAV  O1   C7   SING  N  N   2  
WAV  N4   N5   SING  N  N   3  
WAV  N4   C15  SING  N  N   4  
WAV  C7   C2   SING  N  N   5  
WAV  C14  C15  DOUB  Y  N   6  
WAV  C14  C13  SING  Y  N   7  
WAV  C15  C16  SING  Y  N   8  
WAV  C13  C12  DOUB  Y  N   9  
WAV  O3   C3   SING  N  N  10  
WAV  C2   O2   SING  N  N  11  
WAV  C2   C3   SING  N  N  12  
WAV  C2   C1   SING  N  N  13  
WAV  C3   C4   SING  N  N  14  
WAV  C16  C17  DOUB  Y  N  15  
WAV  C12  C17  SING  Y  N  16  
WAV  C12  N2   SING  N  N  17  
WAV  C1   C6   SING  N  N  18  
WAV  C17  N3   SING  N  N  19  
WAV  N2   C11  SING  N  N  20  
WAV  C4   O4   SING  N  N  21  
WAV  C4   C5   SING  N  N  22  
WAV  C9   O6   SING  N  N  23  
WAV  C9   C8   SING  N  N  24  
WAV  C10  C11  SING  N  N  25  
WAV  C10  O6   SING  N  N  26  
WAV  C6   C5   SING  N  N  27  
WAV  C6   N1   SING  N  N  28  
WAV  C5   O5   SING  N  N  29  
WAV  N1   C8   SING  N  N  30  
WAV  N3   O8   SING  N  N  31  
WAV  N3   O7   DOUB  N  N  32  
WAV  N1   H1   SING  N  N  33  
WAV  C4   H3   SING  N  N  34  
WAV  C5   H4   SING  N  N  35  
WAV  C6   H5   SING  N  N  36  
WAV  C7   H6   SING  N  N  37  
WAV  C7   H7   SING  N  N  38  
WAV  C8   H8   SING  N  N  39  
WAV  C8   H9   SING  N  N  40  
WAV  C10  H10  SING  N  N  41  
WAV  C10  H11  SING  N  N  42  
WAV  C13  H12  SING  N  N  43  
WAV  C1   H13  SING  N  N  44  
WAV  C1   H14  SING  N  N  45  
WAV  C11  H15  SING  N  N  46  
WAV  C11  H16  SING  N  N  47  
WAV  C14  H17  SING  N  N  48  
WAV  C16  H18  SING  N  N  49  
WAV  C3   H19  SING  N  N  50  
WAV  C9   H20  SING  N  N  51  
WAV  C9   H21  SING  N  N  52  
WAV  N2   H22  SING  N  N  53  
WAV  N4   H23  SING  N  N  54  
WAV  N5   H24  SING  N  N  55  
WAV  N6   H25  SING  N  N  56  
WAV  N6   H26  SING  N  N  57  
WAV  O1   H27  SING  N  N  58  
WAV  O2   H28  SING  N  N  59  
WAV  O3   H29  SING  N  N  60  
WAV  O4   H30  SING  N  N  61  
WAV  O5   H31  SING  N  N  62  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WAV  SMILES            ACDLabs               12.01  "N(CCOCCNc1ccc(cc1[N+]([O-])=O)NNN)C2C(C(O)C(C(CO)(C2)O)O)O"  
WAV  InChI             InChI                 1.03   "InChI=1S/C17H30N6O8/c18-22-21-10-1-2-11(13(7-10)23(29)30)19-3-5-31-6-4-20-12-8-17(28,9-24)16(27)15(26)14(12)25/h1-2,7,12,14-16,19-22,24-28H,3-6,8-9,18H2/t12-,14-,15+,16-,17-/m0/s1"  
WAV  InChIKey          InChI                 1.03   DYANQIPKBSETSL-RKOFLFEYSA-N  
WAV  SMILES_CANONICAL  CACTVS                3.385  "NNNc1ccc(NCCOCCN[C@H]2C[C@](O)(CO)[C@@H](O)[C@H](O)[C@H]2O)c(c1)[N+]([O-])=O"  
WAV  SMILES            CACTVS                3.385  "NNNc1ccc(NCCOCCN[CH]2C[C](O)(CO)[CH](O)[CH](O)[CH]2O)c(c1)[N+]([O-])=O"  
WAV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1NNN)[N+](=O)[O-])NCCOCCN[C@H]2C[C@@]([C@H]([C@@H]([C@H]2O)O)O)(CO)O"  
WAV  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1NNN)[N+](=O)[O-])NCCOCCNC2CC(C(C(C2O)O)O)(CO)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WAV  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-{[2-(2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethoxy)ethyl]amino}cyclohexane-1,2,3,4-tetrol"  
WAV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1~{S},2~{S},3~{R},4~{S},5~{S})-5-[2-[2-[[4-(2-azanylhydrazinyl)-2-nitro-phenyl]amino]ethoxy]ethylamino]-1-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WAV  "Create component"  2020-10-05  RCSB  
WAV  "Initial release"   2021-10-06  RCSB  
##
