data_3DX
# 
_chem_comp.id                                    3DX 
_chem_comp.name                                  "3-[4-(4-methylpiperazin-1-yl)phenyl]-9H-pyrrolo[2,3-b:5,4-c']dipyridine-6-carbonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H20 N6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-07-30 
_chem_comp.pdbx_modified_date                    2014-12-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.434 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3DX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4QYH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3DX N6  N6  N 0 1 N N N 9.001  5.819  14.913 -6.839 -4.051 -0.186 N6  3DX 1  
3DX C22 C22 C 0 1 N N N 8.442  6.498  15.668 -6.479 -2.976 -0.113 C22 3DX 2  
3DX C9  C9  C 0 1 Y N N 7.852  7.266  16.513 -6.026 -1.621 -0.020 C9  3DX 3  
3DX N3  N3  N 0 1 Y N N 8.601  8.259  17.047 -6.914 -0.637 0.108  N3  3DX 4  
3DX C10 C10 C 0 1 Y N N 8.103  9.131  17.935 -6.558 0.624  0.198  C10 3DX 5  
3DX C7  C7  C 0 1 Y N N 6.778  9.036  18.324 -5.213 0.988  0.162  C7  3DX 6  
3DX N2  N2  N 0 1 Y N N 5.999  9.761  19.176 -4.564 2.204  0.234  N2  3DX 7  
3DX C2  C2  C 0 1 Y N N 4.755  9.231  19.190 -3.198 2.029  0.152  C2  3DX 8  
3DX C8  C8  C 0 1 Y N N 6.499  7.123  16.865 -4.661 -1.347 -0.059 C8  3DX 9  
3DX C6  C6  C 0 1 Y N N 5.978  8.035  17.793 -4.244 -0.022 0.027  C6  3DX 10 
3DX C1  C1  C 0 1 Y N N 4.713  8.162  18.334 -2.937 0.653  0.021  C1  3DX 11 
3DX C5  C5  C 0 1 Y N N 3.519  7.450  18.170 -1.622 0.208  -0.076 C5  3DX 12 
3DX C4  C4  C 0 1 Y N N 2.397  7.896  18.903 -0.602 1.160  -0.047 C4  3DX 13 
3DX C3  C3  C 0 1 Y N N 2.525  8.998  19.759 -0.938 2.509  0.077  C3  3DX 14 
3DX N1  N1  N 0 1 Y N N 3.687  9.654  19.896 -2.191 2.894  0.176  N1  3DX 15 
3DX C11 C11 C 0 1 Y N N 1.057  7.226  18.811 0.819  0.744  -0.146 C11 3DX 16 
3DX C16 C16 C 0 1 Y N N 0.691  6.522  17.661 1.144  -0.605 -0.274 C16 3DX 17 
3DX C15 C15 C 0 1 Y N N -0.554 5.902  17.569 2.465  -0.989 -0.366 C15 3DX 18 
3DX C14 C14 C 0 1 Y N N -1.482 5.979  18.619 3.472  -0.032 -0.330 C14 3DX 19 
3DX C13 C13 C 0 1 Y N N -1.117 6.687  19.763 3.150  1.314  -0.201 C13 3DX 20 
3DX C12 C12 C 0 1 Y N N 0.128  7.307  19.859 1.831  1.703  -0.116 C12 3DX 21 
3DX N4  N4  N 0 1 N N N -2.702 5.358  18.566 4.809  -0.424 -0.422 N4  3DX 22 
3DX C20 C20 C 0 1 N N N -2.925 4.298  17.581 5.147  -1.397 0.626  C20 3DX 23 
3DX C19 C19 C 0 1 N N N -3.811 3.276  18.275 6.594  -1.860 0.441  C19 3DX 24 
3DX N5  N5  N 0 1 N N N -5.065 3.902  18.735 7.489  -0.696 0.500  N5  3DX 25 
3DX C21 C21 C 0 1 N N N -5.879 2.885  19.436 8.895  -1.108 0.403  C21 3DX 26 
3DX C18 C18 C 0 1 N N N -4.784 5.052  19.626 7.151  0.278  -0.548 C18 3DX 27 
3DX C17 C17 C 0 1 N N N -3.912 6.090  18.925 5.704  0.740  -0.363 C17 3DX 28 
3DX H1  H1  H 0 1 N N N 8.734  9.905  18.346 -7.315 1.387  0.300  H1  3DX 29 
3DX H2  H2  H 0 1 N N N 6.299  10.555 19.704 -5.006 3.061  0.329  H2  3DX 30 
3DX H3  H3  H 0 1 N N N 5.886  6.343  16.438 -3.941 -2.146 -0.158 H3  3DX 31 
3DX H4  H4  H 0 1 N N N 3.458  6.596  17.511 -1.397 -0.844 -0.170 H4  3DX 32 
3DX H5  H5  H 0 1 N N N 1.665  9.328  20.323 -0.152 3.250  0.101  H5  3DX 33 
3DX H6  H6  H 0 1 N N N 1.381  6.457  16.833 0.361  -1.349 -0.302 H6  3DX 34 
3DX H7  H7  H 0 1 N N N -0.809 5.353  16.675 2.717  -2.035 -0.466 H7  3DX 35 
3DX H8  H8  H 0 1 N N N -1.810 6.756  20.588 3.935  2.056  -0.172 H8  3DX 36 
3DX H9  H9  H 0 1 N N N 0.381  7.858  20.753 1.581  2.749  -0.021 H9  3DX 37 
3DX H10 H10 H 0 1 N N N -1.969 3.840  17.286 5.036  -0.931 1.605  H10 3DX 38 
3DX H11 H11 H 0 1 N N N -3.429 4.701  16.690 4.478  -2.256 0.553  H11 3DX 39 
3DX H12 H12 H 0 1 N N N -4.049 2.466  17.570 6.856  -2.560 1.235  H12 3DX 40 
3DX H13 H13 H 0 1 N N N -3.275 2.862  19.142 6.699  -2.351 -0.526 H13 3DX 41 
3DX H15 H15 H 0 1 N N N -6.817 3.342  19.784 9.058  -1.626 -0.542 H15 3DX 42 
3DX H16 H16 H 0 1 N N N -6.107 2.059  18.746 9.536  -0.227 0.449  H16 3DX 43 
3DX H17 H17 H 0 1 N N N -5.318 2.498  20.299 9.137  -1.776 1.230  H17 3DX 44 
3DX H18 H18 H 0 1 N N N -5.735 5.521  19.919 7.819  1.136  -0.475 H18 3DX 45 
3DX H19 H19 H 0 1 N N N -4.261 4.691  20.524 7.263  -0.188 -1.527 H19 3DX 46 
3DX H20 H20 H 0 1 N N N -3.677 6.924  19.603 5.442  1.441  -1.157 H20 3DX 47 
3DX H21 H21 H 0 1 N N N -4.414 6.478  18.027 5.599  1.231  0.604  H21 3DX 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3DX N6  C22 TRIP N N 1  
3DX C22 C9  SING N N 2  
3DX C9  C8  DOUB Y N 3  
3DX C9  N3  SING Y N 4  
3DX C8  C6  SING Y N 5  
3DX N3  C10 DOUB Y N 6  
3DX C15 C16 DOUB Y N 7  
3DX C15 C14 SING Y N 8  
3DX C20 C19 SING N N 9  
3DX C20 N4  SING N N 10 
3DX C16 C11 SING Y N 11 
3DX C6  C7  DOUB Y N 12 
3DX C6  C1  SING Y N 13 
3DX C10 C7  SING Y N 14 
3DX C5  C1  DOUB Y N 15 
3DX C5  C4  SING Y N 16 
3DX C19 N5  SING N N 17 
3DX C7  N2  SING Y N 18 
3DX C1  C2  SING Y N 19 
3DX N4  C14 SING N N 20 
3DX N4  C17 SING N N 21 
3DX C14 C13 DOUB Y N 22 
3DX N5  C21 SING N N 23 
3DX N5  C18 SING N N 24 
3DX C11 C4  SING N N 25 
3DX C11 C12 DOUB Y N 26 
3DX C4  C3  DOUB Y N 27 
3DX C17 C18 SING N N 28 
3DX N2  C2  SING Y N 29 
3DX C2  N1  DOUB Y N 30 
3DX C3  N1  SING Y N 31 
3DX C13 C12 SING Y N 32 
3DX C10 H1  SING N N 33 
3DX N2  H2  SING N N 34 
3DX C8  H3  SING N N 35 
3DX C5  H4  SING N N 36 
3DX C3  H5  SING N N 37 
3DX C16 H6  SING N N 38 
3DX C15 H7  SING N N 39 
3DX C13 H8  SING N N 40 
3DX C12 H9  SING N N 41 
3DX C20 H10 SING N N 42 
3DX C20 H11 SING N N 43 
3DX C19 H12 SING N N 44 
3DX C19 H13 SING N N 45 
3DX C21 H15 SING N N 46 
3DX C21 H16 SING N N 47 
3DX C21 H17 SING N N 48 
3DX C18 H18 SING N N 49 
3DX C18 H19 SING N N 50 
3DX C17 H20 SING N N 51 
3DX C17 H21 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3DX SMILES           ACDLabs              12.01 "N#Cc5ncc2c(c1cc(cnc1n2)c3ccc(cc3)N4CCN(C)CC4)c5"                                                                                                    
3DX InChI            InChI                1.03  "InChI=1S/C22H20N6/c1-27-6-8-28(9-7-27)18-4-2-15(3-5-18)16-10-20-19-11-17(12-23)24-14-21(19)26-22(20)25-13-16/h2-5,10-11,13-14H,6-9H2,1H3,(H,25,26)" 
3DX InChIKey         InChI                1.03  PVRJSOWSQUNARV-UHFFFAOYSA-N                                                                                                                          
3DX SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)c2ccc(cc2)c3cnc4[nH]c5cnc(cc5c4c3)C#N"                                                                                                   
3DX SMILES           CACTVS               3.385 "CN1CCN(CC1)c2ccc(cc2)c3cnc4[nH]c5cnc(cc5c4c3)C#N"                                                                                                   
3DX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)c2ccc(cc2)c3cc4c5cc(ncc5[nH]c4nc3)C#N"                                                                                                   
3DX SMILES           "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)c2ccc(cc2)c3cc4c5cc(ncc5[nH]c4nc3)C#N"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3DX "SYSTEMATIC NAME" ACDLabs 12.01 "3-[4-(4-methylpiperazin-1-yl)phenyl]-9H-pyrrolo[2,3-b:5,4-c']dipyridine-6-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3DX "Create component" 2014-07-30 RCSB 
3DX "Initial release"  2014-12-17 RCSB 
# 
