data_CDX
#

_chem_comp.id                                   CDX
_chem_comp.name                                 "(S)-4,4'-(1-METHYL-1,2-ETHANEDIYL)BIS-2,6-PIPERAZINEDIONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H16 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ICRF-187
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-07-25
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       268.269
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CDX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CDX  OAO   OAO   O  0  1  N  N  N  28.238  36.237  35.557  -2.538  -0.457   3.208  OAO   CDX   1  
CDX  CAP   CAP   C  0  1  N  N  N  27.474  36.047  34.639  -1.356  -0.242   3.048  CAP   CDX   2  
CDX  NAI   NAI   N  0  1  N  N  N  26.919  37.027  33.903  -0.446  -0.933   3.761  NAI   CDX   3  
CDX  CAC   CAC   C  0  1  N  N  N  26.075  36.809  32.883   0.868  -0.698   3.595  CAC   CDX   4  
CDX  OAB   OAB   O  0  1  N  N  N  25.590  37.715  32.244   1.680  -1.321   4.245  OAB   CDX   5  
CDX  CAD   CAD   C  0  1  N  N  N  25.758  35.371  32.517   1.335   0.336   2.605  CAD   CDX   6  
CDX  CAQ   CAQ   C  0  1  N  N  N  27.132  34.636  34.274  -0.910   0.796   2.053  CAQ   CDX   7  
CDX  NAJ   NAJ   N  0  1  N  N  N  26.983  34.632  32.825   0.387   0.408   1.485  NAJ   CDX   8  
CDX  CAK   CAK   C  0  1  N  N  N  27.004  33.258  32.353   0.825   1.522   0.633  CAK   CDX   9  
CDX  CAL   CAL   C  0  1  N  N  R  28.466  32.907  32.072  -0.123   1.654  -0.559  CAL   CDX  10  
CDX  CAE   CAE   C  0  1  N  N  N  29.376  33.044  33.289   0.332   2.814  -1.446  CAE   CDX  11  
CDX  NAM   NAM   N  0  1  N  N  N  28.584  31.557  31.504  -0.110   0.408  -1.336  NAM   CDX  12  
CDX  CAR   CAR   C  0  1  N  N  N  29.048  30.493  32.399   1.151   0.392  -2.087  CAR   CDX  13  
CDX  CAS   CAS   C  0  1  N  N  N  29.584  29.468  31.418   1.173  -0.794  -3.014  CAS   CDX  14  
CDX  OAT   OAT   O  0  1  N  N  N  30.567  28.812  31.703   2.226  -1.329  -3.286  OAT   CDX  15  
CDX  NAN   NAN   N  0  1  N  N  N  28.945  29.357  30.230   0.026  -1.262  -3.542  NAN   CDX  16  
CDX  CAG   CAG   C  0  1  N  N  N  27.853  30.072  29.885  -1.148  -0.671  -3.251  CAG   CDX  17  
CDX  CAF   CAF   C  0  1  N  N  N  27.352  31.073  30.890  -1.190   0.516  -2.325  CAF   CDX  18  
CDX  OAH   OAH   O  0  1  N  N  N  27.279  29.966  28.818  -2.175  -1.096  -3.735  OAH   CDX  19  
CDX  HAI   HAI   H  0  1  N  N  N  27.152  37.993  34.132  -0.740  -1.604   4.398  HAI   CDX  20  
CDX  HAD1  1HAD  H  0  0  N  N  N  24.846  34.966  33.015   2.320   0.060   2.229  HAD1  CDX  21  
CDX  HAD2  2HAD  H  0  0  N  N  N  25.398  35.237  31.470   1.392   1.307   3.095  HAD2  CDX  22  
CDX  HAQ1  1HAQ  H  0  0  N  N  N  27.865  33.885  34.650  -0.815   1.760   2.553  HAQ1  CDX  23  
CDX  HAQ2  2HAQ  H  0  0  N  N  N  26.243  34.235  34.816  -1.647   0.873   1.253  HAQ2  CDX  24  
CDX  HAK1  1HAK  H  0  0  N  N  N  26.508  32.545  33.053   1.835   1.328   0.274  HAK1  CDX  25  
CDX  HAK2  2HAK  H  0  0  N  N  N  26.335  33.084  31.478   0.815   2.446   1.210  HAK2  CDX  26  
CDX  HAL   HAL   H  0  1  N  N  N  28.815  33.658  31.326  -1.134   1.848  -0.199  HAL   CDX  27  
CDX  HAE1  1HAE  H  0  0  N  N  N  30.441  32.788  33.084   1.385   2.688  -1.696  HAE1  CDX  28  
CDX  HAE2  2HAE  H  0  0  N  N  N  29.294  34.065  33.727  -0.259   2.826  -2.362  HAE2  CDX  29  
CDX  HAE3  3HAE  H  0  0  N  N  N  28.984  32.442  34.142   0.195   3.755  -0.913  HAE3  CDX  30  
CDX  HAR1  1HAR  H  0  0  N  N  N  29.769  30.817  33.184   1.240   1.310  -2.669  HAR1  CDX  31  
CDX  HAR2  2HAR  H  0  0  N  N  N  28.282  30.108  33.112   1.987   0.323  -1.389  HAR2  CDX  32  
CDX  HAN   HAN   H  0  1  N  N  N  29.310  28.690  29.549   0.046  -2.029  -4.136  HAN   CDX  33  
CDX  HAF1  1HAF  H  0  0  N  N  N  26.596  30.676  31.608  -2.151   0.543  -1.812  HAF1  CDX  34  
CDX  HAF2  2HAF  H  0  0  N  N  N  26.695  31.869  30.468  -1.062   1.431  -2.904  HAF2  CDX  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CDX  OAO  CAP   DOUB  N  N   1  
CDX  CAP  NAI   SING  N  N   2  
CDX  CAP  CAQ   SING  N  N   3  
CDX  NAI  CAC   SING  N  N   4  
CDX  NAI  HAI   SING  N  N   5  
CDX  CAC  OAB   DOUB  N  N   6  
CDX  CAC  CAD   SING  N  N   7  
CDX  CAD  NAJ   SING  N  N   8  
CDX  CAD  HAD1  SING  N  N   9  
CDX  CAD  HAD2  SING  N  N  10  
CDX  CAQ  NAJ   SING  N  N  11  
CDX  CAQ  HAQ1  SING  N  N  12  
CDX  CAQ  HAQ2  SING  N  N  13  
CDX  NAJ  CAK   SING  N  N  14  
CDX  CAK  CAL   SING  N  N  15  
CDX  CAK  HAK1  SING  N  N  16  
CDX  CAK  HAK2  SING  N  N  17  
CDX  CAL  CAE   SING  N  N  18  
CDX  CAL  NAM   SING  N  N  19  
CDX  CAL  HAL   SING  N  N  20  
CDX  CAE  HAE1  SING  N  N  21  
CDX  CAE  HAE2  SING  N  N  22  
CDX  CAE  HAE3  SING  N  N  23  
CDX  NAM  CAR   SING  N  N  24  
CDX  NAM  CAF   SING  N  N  25  
CDX  CAR  CAS   SING  N  N  26  
CDX  CAR  HAR1  SING  N  N  27  
CDX  CAR  HAR2  SING  N  N  28  
CDX  CAS  OAT   DOUB  N  N  29  
CDX  CAS  NAN   SING  N  N  30  
CDX  NAN  CAG   SING  N  N  31  
CDX  NAN  HAN   SING  N  N  32  
CDX  CAG  CAF   SING  N  N  33  
CDX  CAG  OAH   DOUB  N  N  34  
CDX  CAF  HAF1  SING  N  N  35  
CDX  CAF  HAF2  SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CDX  SMILES            ACDLabs               10.04  "O=C2NC(=O)CN(CC(N1CC(=O)NC(=O)C1)C)C2"  
CDX  SMILES_CANONICAL  CACTVS                3.341  "C[C@H](CN1CC(=O)NC(=O)C1)N2CC(=O)NC(=O)C2"  
CDX  SMILES            CACTVS                3.341  "C[CH](CN1CC(=O)NC(=O)C1)N2CC(=O)NC(=O)C2"  
CDX  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H](CN1CC(=O)NC(=O)C1)N2CC(=O)NC(=O)C2"  
CDX  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(CN1CC(=O)NC(=O)C1)N2CC(=O)NC(=O)C2"  
CDX  InChI             InChI                 1.03   "InChI=1S/C11H16N4O4/c1-7(15-5-10(18)13-11(19)6-15)2-14-3-8(16)12-9(17)4-14/h7H,2-6H2,1H3,(H,12,16,17)(H,13,18,19)/t7-/m1/s1"  
CDX  InChIKey          InChI                 1.03   BMKDZUISNHGIBY-SSDOTTSWSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CDX  "SYSTEMATIC NAME"  ACDLabs               10.04  "4,4'-(2R)-propane-1,2-diyldipiperazine-2,6-dione"  
CDX  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "4-[(2R)-2-(3,5-dioxopiperazin-1-yl)propyl]piperazine-2,6-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CDX  "Create component"   2003-07-25  RCSB  
CDX  "Modify descriptor"  2011-06-04  RCSB  
CDX  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CDX
_pdbx_chem_comp_synonyms.name        ICRF-187
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
