data_EBX
#

_chem_comp.id                                   EBX
_chem_comp.name                                 "4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H26 N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-12-10
_chem_comp.pdbx_modified_date                   2020-08-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       426.466
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    EBX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6LFL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EBX  C1   C1   C  0  1  Y  N  N  46.467  -29.356  188.491  -4.796  -0.584  -0.181  C1   EBX   1  
EBX  C2   C2   C  0  1  Y  N  N  47.633  -30.039  188.072  -3.417  -0.792  -0.225  C2   EBX   2  
EBX  C3   C3   C  0  1  Y  N  N  48.625  -29.352  187.343  -2.572   0.313  -0.398  C3   EBX   3  
EBX  C4   C4   C  0  1  Y  N  N  48.386  -28.038  186.919  -3.149   1.571  -0.520  C4   EBX   4  
EBX  C5   C5   C  0  1  Y  N  N  47.224  -27.384  187.348  -4.528   1.694  -0.466  C5   EBX   5  
EBX  C6   C6   C  0  1  N  N  N  45.469  -30.006  189.244  -5.706  -1.734   0.001  C6   EBX   6  
EBX  C7   C7   C  0  1  N  N  N  46.782  -29.527  191.298  -7.920  -2.664   0.416  C7   EBX   7  
EBX  C8   C8   C  0  1  N  N  N  44.571  -30.798  191.363  -7.569  -0.169   0.119  C8   EBX   8  
EBX  C11  C9   C  0  1  N  N  N  52.904  -29.439  186.886   0.877   2.570   0.861  C11  EBX   9  
EBX  C10  C10  C  0  1  N  N  N  52.093  -30.550  186.665   1.027   1.316   0.102  C10  EBX  10  
EBX  C12  C11  C  0  1  N  N  N  51.784  -28.681  187.231  -0.594   2.360   0.840  C12  EBX  11  
EBX  C13  C12  C  0  1  N  N  R  53.624  -32.367  186.238   3.460   1.119  -0.178  C13  EBX  12  
EBX  C14  C13  C  0  1  Y  N  N  53.886  -33.433  187.323   4.434  -0.030  -0.228  C14  EBX  13  
EBX  C15  C14  C  0  1  N  N  N  53.981  -32.984  184.871   3.806   2.129  -1.274  C15  EBX  14  
EBX  C16  C15  C  0  1  N  N  N  53.605  -32.081  183.701   2.897   3.353  -1.144  C16  EBX  15  
EBX  C17  C16  C  0  1  Y  N  N  54.948  -34.911  188.457   5.409  -1.898  -0.838  C17  EBX  16  
EBX  C18  C17  C  0  1  Y  N  N  53.710  -34.818  188.933   6.128  -1.398   0.183  C18  EBX  17  
EBX  C19  C18  C  0  1  Y  N  N  53.027  -33.902  188.232   5.498  -0.195   0.578  C19  EBX  18  
EBX  C20  C19  C  0  1  N  N  N  53.231  -35.673  190.143   7.367  -2.004   0.790  C20  EBX  19  
EBX  C21  C20  C  0  1  N  N  N  52.875  -37.110  189.737   7.039  -3.394   1.338  C21  EBX  20  
EBX  C22  C21  C  0  1  N  N  N  52.107  -35.030  190.971   8.454  -2.121  -0.280  C22  EBX  21  
EBX  C9   C22  C  0  1  N  N  N  50.967  -29.793  186.984  -0.365   1.120   0.076  C9   EBX  22  
EBX  N1   N1   N  0  1  Y  N  N  46.257  -28.078  188.103  -5.298   0.643  -0.297  N1   EBX  23  
EBX  N2   N2   N  0  1  N  N  N  45.619  -30.105  190.596  -7.027  -1.528   0.174  N2   EBX  24  
EBX  N3   N3   N  0  1  N  N  N  49.660  -30.118  186.929  -1.187   0.153  -0.448  N3   EBX  25  
EBX  N4   N4   N  0  1  N  N  N  52.244  -31.827  186.280   2.100   0.616  -0.388  N4   EBX  26  
EBX  O1   O1   O  0  1  N  N  N  47.831  -31.206  188.424  -2.902  -2.042  -0.101  O1   EBX  27  
EBX  O2   O2   O  0  1  N  N  N  44.497  -30.476  188.654  -5.263  -2.866  -0.005  O2   EBX  28  
EBX  O3   O3   O  0  1  N  N  N  51.620  -27.521  187.619  -1.566   2.954   1.267  O3   EBX  29  
EBX  O4   O4   O  0  1  N  N  N  54.119  -29.248  186.888   1.631   3.411   1.314  O4   EBX  30  
EBX  O5   O5   O  0  1  Y  N  N  55.066  -34.066  187.457   4.383  -1.066  -1.082  O5   EBX  31  
EBX  H1   H1   H  0  1  N  N  N  49.088  -27.536  186.270  -2.528   2.445  -0.654  H1   EBX  32  
EBX  H2   H2   H  0  1  N  N  N  47.068  -26.345  187.099  -4.977   2.672  -0.560  H2   EBX  33  
EBX  H4   H4   H  0  1  N  N  N  46.696  -29.725  192.377  -7.993  -2.846   1.488  H4   EBX  34  
EBX  H5   H5   H  0  1  N  N  N  47.706  -29.984  190.914  -8.909  -2.440   0.017  H5   EBX  35  
EBX  H6   H6   H  0  1  N  N  N  46.811  -28.441  191.126  -7.521  -3.551  -0.077  H6   EBX  36  
EBX  H7   H7   H  0  1  N  N  N  44.835  -30.795  192.431  -7.750   0.109  -0.920  H7   EBX  37  
EBX  H8   H8   H  0  1  N  N  N  43.610  -30.281  191.221  -8.506  -0.129   0.674  H8   EBX  38  
EBX  H9   H9   H  0  1  N  N  N  44.484  -31.836  191.010  -6.855   0.526   0.561  H9   EBX  39  
EBX  H10  H10  H  0  1  N  N  N  54.323  -31.536  186.417   3.521   1.604   0.796  H10  EBX  40  
EBX  H11  H11  H  0  1  N  N  N  53.445  -33.939  184.765   4.846   2.436  -1.169  H11  EBX  41  
EBX  H12  H12  H  0  1  N  N  N  55.065  -33.167  184.840   3.658   1.669  -2.251  H12  EBX  42  
EBX  H13  H13  H  0  1  N  N  N  53.882  -32.571  182.756   1.856   3.046  -1.248  H13  EBX  43  
EBX  H14  H14  H  0  1  N  N  N  52.521  -31.896  183.714   3.044   3.813  -0.167  H14  EBX  44  
EBX  H15  H15  H  0  1  N  N  N  54.141  -31.125  183.789   3.143   4.073  -1.925  H15  EBX  45  
EBX  H16  H16  H  0  1  N  N  N  55.722  -35.567  188.828   5.621  -2.812  -1.371  H16  EBX  46  
EBX  H17  H17  H  0  1  N  N  N  51.998  -33.605  188.373   5.812   0.465   1.373  H17  EBX  47  
EBX  H18  H18  H  0  1  N  N  N  54.097  -35.752  190.816   7.723  -1.368   1.601  H18  EBX  48  
EBX  H19  H19  H  0  1  N  N  N  52.544  -37.671  190.624   6.683  -4.030   0.527  H19  EBX  49  
EBX  H20  H20  H  0  1  N  N  N  52.066  -37.091  188.992   7.935  -3.832   1.777  H20  EBX  50  
EBX  H21  H21  H  0  1  N  N  N  53.760  -37.599  189.304   6.265  -3.310   2.101  H21  EBX  51  
EBX  H22  H22  H  0  1  N  N  N  51.833  -35.699  191.800   8.688  -1.131  -0.671  H22  EBX  52  
EBX  H23  H23  H  0  1  N  N  N  52.454  -34.068  191.376   9.351  -2.560   0.159  H23  EBX  53  
EBX  H24  H24  H  0  1  N  N  N  51.229  -34.862  190.330   8.099  -2.757  -1.091  H24  EBX  54  
EBX  H25  H25  H  0  1  N  N  N  49.433  -31.013  186.545  -0.804  -0.641  -0.852  H25  EBX  55  
EBX  H26  H26  H  0  1  N  N  N  51.861  -31.910  185.360   1.959  -0.212  -0.873  H26  EBX  56  
EBX  H3   H3   H  0  1  N  N  N  47.075  -31.526  188.902  -2.797  -2.509  -0.941  H3   EBX  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EBX  C16  C15  SING  N  N   1  
EBX  C15  C13  SING  N  N   2  
EBX  C13  N4   SING  N  N   3  
EBX  C13  C14  SING  N  N   4  
EBX  N4   C10  SING  N  N   5  
EBX  C10  C11  SING  N  N   6  
EBX  C10  C9   DOUB  N  N   7  
EBX  C11  O4   DOUB  N  N   8  
EBX  C11  C12  SING  N  N   9  
EBX  C4   C3   DOUB  Y  N  10  
EBX  C4   C5   SING  Y  N  11  
EBX  N3   C9   SING  N  N  12  
EBX  N3   C3   SING  N  N  13  
EBX  C9   C12  SING  N  N  14  
EBX  C12  O3   DOUB  N  N  15  
EBX  C14  O5   SING  Y  N  16  
EBX  C14  C19  DOUB  Y  N  17  
EBX  C3   C2   SING  Y  N  18  
EBX  C5   N1   DOUB  Y  N  19  
EBX  O5   C17  SING  Y  N  20  
EBX  C2   O1   SING  N  N  21  
EBX  C2   C1   DOUB  Y  N  22  
EBX  N1   C1   SING  Y  N  23  
EBX  C19  C18  SING  Y  N  24  
EBX  C17  C18  DOUB  Y  N  25  
EBX  C1   C6   SING  N  N  26  
EBX  O2   C6   DOUB  N  N  27  
EBX  C18  C20  SING  N  N  28  
EBX  C6   N2   SING  N  N  29  
EBX  C21  C20  SING  N  N  30  
EBX  C20  C22  SING  N  N  31  
EBX  N2   C7   SING  N  N  32  
EBX  N2   C8   SING  N  N  33  
EBX  C4   H1   SING  N  N  34  
EBX  C5   H2   SING  N  N  35  
EBX  C7   H4   SING  N  N  36  
EBX  C7   H5   SING  N  N  37  
EBX  C7   H6   SING  N  N  38  
EBX  C8   H7   SING  N  N  39  
EBX  C8   H8   SING  N  N  40  
EBX  C8   H9   SING  N  N  41  
EBX  C13  H10  SING  N  N  42  
EBX  C15  H11  SING  N  N  43  
EBX  C15  H12  SING  N  N  44  
EBX  C16  H13  SING  N  N  45  
EBX  C16  H14  SING  N  N  46  
EBX  C16  H15  SING  N  N  47  
EBX  C17  H16  SING  N  N  48  
EBX  C19  H17  SING  N  N  49  
EBX  C20  H18  SING  N  N  50  
EBX  C21  H19  SING  N  N  51  
EBX  C21  H20  SING  N  N  52  
EBX  C21  H21  SING  N  N  53  
EBX  C22  H22  SING  N  N  54  
EBX  C22  H23  SING  N  N  55  
EBX  C22  H24  SING  N  N  56  
EBX  N3   H25  SING  N  N  57  
EBX  N4   H26  SING  N  N  58  
EBX  O1   H3   SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EBX  InChI             InChI                 1.03   "InChI=1S/C22H26N4O5/c1-6-13(15-9-12(10-31-15)11(2)3)24-16-17(21(29)20(16)28)25-14-7-8-23-18(19(14)27)22(30)26(4)5/h7-11,13,24,27H,6H2,1-5H3,(H,23,25)/t13-/m1/s1"  
EBX  InChIKey          InChI                 1.03   JSZQMZJVSCVDMA-CYBMUJFWSA-N  
EBX  SMILES_CANONICAL  CACTVS                3.385  "CC[C@@H](NC1=C(Nc2ccnc(c2O)C(=O)N(C)C)C(=O)C1=O)c3occ(c3)C(C)C"  
EBX  SMILES            CACTVS                3.385  "CC[CH](NC1=C(Nc2ccnc(c2O)C(=O)N(C)C)C(=O)C1=O)c3occ(c3)C(C)C"  
EBX  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC[C@H](c1cc(co1)C(C)C)NC2=C(C(=O)C2=O)Nc3ccnc(c3O)C(=O)N(C)C"  
EBX  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC(c1cc(co1)C(C)C)NC2=C(C(=O)C2=O)Nc3ccnc(c3O)C(=O)N(C)C"  
#
_pdbx_chem_comp_identifier.comp_id          EBX
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EBX  "Create component"  2019-12-10  PDBJ  
EBX  "Initial release"   2020-09-02  RCSB  
##
