data_UAX
# 
_chem_comp.id                                    UAX 
_chem_comp.name                                  "~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{S})-3-oxidanyl-4-oxidanylidene-1-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H41 N5 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(S,S,R)-13b; ketoamide inhibitor 13b (bound)" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-31 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        595.687 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UAX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CAJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UAX O26 O1  O 0 1 N N N N N N -13.556 5.356  -0.669 4.681  1.243  0.135  O26 UAX 1  
UAX C24 C1  C 0 1 N N N N N N -14.639 5.368  -0.137 5.615  0.660  0.648  C24 UAX 2  
UAX O25 O2  O 0 1 N N N N N N -15.456 6.428  -0.027 6.862  1.158  0.541  O25 UAX 3  
UAX C27 C2  C 0 1 N N N N N N -15.115 7.604  0.804  7.015  2.396  -0.203 C27 UAX 4  
UAX C31 C3  C 0 1 N N N N N N -14.737 8.747  -0.111 6.528  2.192  -1.639 C31 UAX 5  
UAX C32 C4  C 0 1 N N N N N N -16.395 7.912  1.546  6.188  3.497  0.465  C32 UAX 6  
UAX C33 C5  C 0 1 N N N N N N -13.990 7.271  1.760  8.489  2.804  -0.217 C33 UAX 7  
UAX N23 N1  N 0 1 N N N N N N -15.245 4.311  0.449  5.404  -0.484 1.330  N23 UAX 8  
UAX C19 C6  C 0 1 N N N N N N -15.568 3.076  -0.142 4.096  -0.948 1.531  C19 UAX 9  
UAX C21 C7  C 0 1 N N N N N N -15.622 2.003  0.740  3.266  -1.248 0.429  C21 UAX 10 
UAX O22 O3  O 0 1 N N N N N N -15.405 2.076  1.941  3.686  -1.104 -0.708 O22 UAX 11 
UAX C18 C8  C 0 1 N N N N N N -15.819 2.913  -1.511 3.610  -1.120 2.799  C18 UAX 12 
UAX C17 C9  C 0 1 N N N N N N -16.128 1.649  -2.004 2.299  -1.586 2.972  C17 UAX 13 
UAX C16 C10 C 0 1 N N N N N N -16.184 0.606  -1.155 1.530  -1.859 1.894  C16 UAX 14 
UAX N15 N2  N 0 1 N N N N N N -15.962 0.763  0.188  2.012  -1.693 0.633  N15 UAX 15 
UAX C20 C11 C 0 1 N N S N N N -15.997 -0.404 1.089  1.156  -1.997 -0.516 C20 UAX 16 
UAX C22 C12 C 0 1 N N N N N N -16.915 -1.534 0.612  0.737  -3.468 -0.465 C22 UAX 17 
UAX C29 C13 C 0 1 N N N N N N -18.378 -1.216 0.773  1.972  -4.356 -0.634 C29 UAX 18 
UAX C34 C14 C 0 1 N N N N N N -19.427 -2.179 0.314  2.357  -5.261 0.538  C34 UAX 19 
UAX C30 C15 C 0 1 N N N N N N -19.201 -1.968 1.771  1.748  -5.866 -0.729 C30 UAX 20 
UAX C36 C16 C 0 1 N N N N N N -14.576 -0.901 1.309  -0.072 -1.124 -0.472 C36 UAX 21 
UAX O37 O4  O 0 1 N N N N N N -13.781 -0.884 0.374  -0.217 -0.326 0.430  O37 UAX 22 
UAX N38 N3  N 0 1 N N N N N N -14.245 -1.332 2.532  -1.008 -1.229 -1.436 N38 UAX 23 
UAX C40 C17 C 0 1 N N S N N N -12.883 -1.703 2.889  -2.201 -0.380 -1.394 C40 UAX 24 
UAX C42 C18 C 0 1 N N N N N N -12.353 -0.798 3.993  -1.891 0.968  -2.047 C42 UAX 25 
UAX C45 C19 C 0 1 N N R N N N -11.060 -0.133 3.532  -0.839 1.707  -1.217 C45 UAX 26 
UAX C47 C20 C 0 1 N N N N N N -10.610 1.017  4.408  -1.402 2.086  0.135  C47 UAX 27 
UAX O48 O5  O 0 1 N N N N N N -10.894 1.179  5.610  -2.050 1.350  0.848  O48 UAX 28 
UAX N49 N4  N 0 1 N N N N N N -9.851  1.819  3.670  -1.077 3.356  0.430  N49 UAX 29 
UAX C51 C21 C 0 1 N N N N N N -9.940  1.553  2.238  -0.278 3.966  -0.639 C51 UAX 30 
UAX C54 C22 C 0 1 N N N N N N -11.043 0.504  2.149  -0.485 3.061  -1.874 C54 UAX 31 
UAX C57 C23 C 0 1 N N S N N N -12.759 -3.196 3.200  -3.341 -1.064 -2.151 C57 UAX 32 
UAX O40 O6  O 0 1 N N N N N N -11.428 -3.539 3.557  -2.999 -1.167 -3.535 O40 UAX 33 
UAX C35 C24 C 0 1 N N N N N N -13.203 -3.887 1.921  -4.601 -0.251 -2.005 C35 UAX 34 
UAX O41 O7  O 0 1 N N N N N N -14.404 -4.073 1.729  -5.102 0.273  -2.977 O41 UAX 35 
UAX N36 N5  N 0 1 N N N N N N -12.277 -4.221 1.025  -5.172 -0.105 -0.793 N36 UAX 36 
UAX C13 C25 C 0 1 N N N N N N -11.308 -5.276 1.243  -6.397 0.686  -0.650 C13 UAX 37 
UAX C14 C26 C 0 1 Y N N N N N -10.183 -5.307 0.238  -6.826 0.691  0.795  C14 UAX 38 
UAX C28 C27 C 0 1 Y N N N N N -9.483  -6.486 0.023  -6.366 1.676  1.648  C28 UAX 39 
UAX C26 C28 C 0 1 Y N N N N N -8.429  -6.535 -0.878 -6.759 1.681  2.974  C26 UAX 40 
UAX C25 C29 C 0 1 Y N N N N N -8.061  -5.406 -1.566 -7.612 0.701  3.445  C25 UAX 41 
UAX C23 C30 C 0 1 Y N N N N N -8.743  -4.228 -1.360 -8.072 -0.284 2.592  C23 UAX 42 
UAX C15 C31 C 0 1 Y N N N N N -9.794  -4.170 -0.455 -7.683 -0.286 1.265  C15 UAX 43 
UAX H1  H1  H 0 1 N N N N N N -14.480 9.631  0.492  5.477  1.902  -1.629 H1  UAX 44 
UAX H2  H2  H 0 1 N N N N N N -13.870 8.456  -0.722 6.643  3.121  -2.197 H2  UAX 45 
UAX H3  H3  H 0 1 N N N N N N -15.586 8.986  -0.769 7.117  1.408  -2.114 H3  UAX 46 
UAX H4  H4  H 0 1 N N N N N N -16.650 7.068  2.204  6.534  3.642  1.488  H4  UAX 47 
UAX H5  H5  H 0 1 N N N N N N -16.258 8.821  2.151  6.302  4.426  -0.093 H5  UAX 48 
UAX H6  H6  H 0 1 N N N N N N -17.208 8.072  0.823  5.137  3.207  0.475  H6  UAX 49 
UAX H7  H7  H 0 1 N N N N N N -14.295 6.438  2.410  9.078  2.019  -0.692 H7  UAX 50 
UAX H8  H8  H 0 1 N N N N N N -13.096 6.981  1.188  8.604  3.733  -0.775 H8  UAX 51 
UAX H9  H9  H 0 1 N N N N N N -13.760 8.152  2.377  8.836  2.949  0.806  H9  UAX 52 
UAX H10 H10 H 0 1 N N N N N N -15.492 4.419  1.412  6.156  -0.986 1.681  H10 UAX 53 
UAX H11 H11 H 0 1 N N N N N N -15.773 3.761  -2.178 4.230  -0.901 3.656  H11 UAX 54 
UAX H12 H12 H 0 1 N N N N N N -16.321 1.506  -3.057 1.903  -1.727 3.967  H12 UAX 55 
UAX H13 H13 H 0 1 N N N N N N -16.409 -0.377 -1.541 0.521  -2.218 2.036  H13 UAX 56 
UAX H14 H14 H 0 1 N N N N N N -16.379 -0.066 2.063  1.704  -1.808 -1.438 H14 UAX 57 
UAX H15 H15 H 0 1 N N N N N N -16.688 -2.439 1.194  0.267  -3.679 0.496  H15 UAX 58 
UAX H16 H16 H 0 1 N N N N N N -16.713 -1.723 -0.453 0.030  -3.672 -1.268 H16 UAX 59 
UAX H17 H17 H 0 1 N N N N N N -18.637 -0.153 0.659  2.780  -3.929 -1.227 H17 UAX 60 
UAX H18 H18 H 0 1 N N N N N N -20.347 -1.805 -0.159 3.419  -5.430 0.715  H18 UAX 61 
UAX H19 H19 H 0 1 N N N N N N -19.133 -3.129 -0.156 1.730  -5.225 1.429  H19 UAX 62 
UAX H20 H20 H 0 1 N N N N N N -19.954 -1.438 2.373  0.721  -6.228 -0.671 H20 UAX 63 
UAX H21 H21 H 0 1 N N N N N N -18.740 -2.762 2.376  2.409  -6.433 -1.384 H21 UAX 64 
UAX H22 H22 H 0 1 N N N N N N -14.960 -1.402 3.227  -0.892 -1.867 -2.157 H22 UAX 65 
UAX H23 H23 H 0 1 N N N N N N -12.254 -1.518 2.006  -2.498 -0.222 -0.357 H23 UAX 66 
UAX H24 H24 H 0 1 N N N N N N -13.101 -0.025 4.223  -1.510 0.804  -3.055 H24 UAX 67 
UAX H25 H25 H 0 1 N N N N N N -12.156 -1.397 4.894  -2.801 1.566  -2.096 H25 UAX 68 
UAX H26 H26 H 0 1 N N N N N N -10.269 -0.897 3.554  0.054  1.092  -1.100 H26 UAX 69 
UAX H27 H27 H 0 1 N N N N N N -9.273  2.537  4.059  -1.338 3.812  1.246  H27 UAX 70 
UAX H28 H28 H 0 1 N N N N N N -8.989  1.160  1.850  -0.633 4.975  -0.847 H28 UAX 71 
UAX H29 H29 H 0 1 N N N N N N -10.214 2.463  1.684  0.775  3.987  -0.358 H29 UAX 72 
UAX H30 H30 H 0 1 N N N N N N -12.012 0.974  1.923  0.432  2.983  -2.459 H30 UAX 73 
UAX H31 H31 H 0 1 N N N N N N -10.809 -0.244 1.377  -1.309 3.423  -2.490 H31 UAX 74 
UAX H32 H32 H 0 1 N N N N N N -13.456 -3.453 4.011  -3.503 -2.062 -1.742 H32 UAX 75 
UAX H33 H33 H 0 1 N N N N N N -11.189 -3.089 4.359  -2.840 -0.316 -3.965 H33 UAX 76 
UAX H34 H34 H 0 1 N N N N N N -12.249 -3.720 0.160  -4.772 -0.524 -0.014 H34 UAX 77 
UAX H35 H35 H 0 1 N N N N N N -11.834 -6.241 1.200  -6.209 1.708  -0.977 H35 UAX 78 
UAX H36 H36 H 0 1 N N N N N N -10.872 -5.141 2.244  -7.186 0.247  -1.261 H36 UAX 79 
UAX H37 H37 H 0 1 N N N N N N -9.763  -7.378 0.565  -5.699 2.442  1.280  H37 UAX 80 
UAX H38 H38 H 0 1 N N N N N N -7.898  -7.462 -1.038 -6.399 2.451  3.641  H38 UAX 81 
UAX H39 H39 H 0 1 N N N N N N -7.240  -5.442 -2.266 -7.915 0.702  4.482  H39 UAX 82 
UAX H40 H40 H 0 1 N N N N N N -8.458  -3.342 -1.907 -8.738 -1.050 2.960  H40 UAX 83 
UAX H41 H41 H 0 1 N N N N N N -10.311 -3.236 -0.290 -8.043 -1.055 0.598  H41 UAX 84 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UAX C17 C18 SING N N 1  
UAX C17 C16 DOUB N N 2  
UAX C25 C23 DOUB Y N 3  
UAX C25 C26 SING Y N 4  
UAX C18 C19 DOUB N N 5  
UAX C23 C15 SING Y N 6  
UAX C16 N15 SING N N 7  
UAX C26 C28 DOUB Y N 8  
UAX O26 C24 DOUB N N 9  
UAX C15 C14 DOUB Y N 10 
UAX C19 N23 SING N N 11 
UAX C19 C21 SING N N 12 
UAX C24 O25 SING N N 13 
UAX C24 N23 SING N N 14 
UAX C31 C27 SING N N 15 
UAX O25 C27 SING N N 16 
UAX C28 C14 SING Y N 17 
UAX N15 C21 SING N N 18 
UAX N15 C20 SING N N 19 
UAX C14 C13 SING N N 20 
UAX C34 C29 SING N N 21 
UAX C34 C30 SING N N 22 
UAX O37 C36 DOUB N N 23 
UAX C22 C29 SING N N 24 
UAX C22 C20 SING N N 25 
UAX C21 O22 DOUB N N 26 
UAX C29 C30 SING N N 27 
UAX C27 C32 SING N N 28 
UAX C27 C33 SING N N 29 
UAX N36 C13 SING N N 30 
UAX N36 C35 SING N N 31 
UAX C20 C36 SING N N 32 
UAX C36 N38 SING N N 33 
UAX O41 C35 DOUB N N 34 
UAX C35 C57 SING N N 35 
UAX C54 C51 SING N N 36 
UAX C54 C45 SING N N 37 
UAX C51 N49 SING N N 38 
UAX N38 C40 SING N N 39 
UAX C40 C57 SING N N 40 
UAX C40 C42 SING N N 41 
UAX C57 O40 SING N N 42 
UAX C45 C42 SING N N 43 
UAX C45 C47 SING N N 44 
UAX N49 C47 SING N N 45 
UAX C47 O48 DOUB N N 46 
UAX C31 H1  SING N N 47 
UAX C31 H2  SING N N 48 
UAX C31 H3  SING N N 49 
UAX C32 H4  SING N N 50 
UAX C32 H5  SING N N 51 
UAX C32 H6  SING N N 52 
UAX C33 H7  SING N N 53 
UAX C33 H8  SING N N 54 
UAX C33 H9  SING N N 55 
UAX N23 H10 SING N N 56 
UAX C18 H11 SING N N 57 
UAX C17 H12 SING N N 58 
UAX C16 H13 SING N N 59 
UAX C20 H14 SING N N 60 
UAX C22 H15 SING N N 61 
UAX C22 H16 SING N N 62 
UAX C29 H17 SING N N 63 
UAX C34 H18 SING N N 64 
UAX C34 H19 SING N N 65 
UAX C30 H20 SING N N 66 
UAX C30 H21 SING N N 67 
UAX N38 H22 SING N N 68 
UAX C40 H23 SING N N 69 
UAX C42 H24 SING N N 70 
UAX C42 H25 SING N N 71 
UAX C45 H26 SING N N 72 
UAX N49 H27 SING N N 73 
UAX C51 H28 SING N N 74 
UAX C51 H29 SING N N 75 
UAX C54 H30 SING N N 76 
UAX C54 H31 SING N N 77 
UAX C57 H32 SING N N 78 
UAX O40 H33 SING N N 79 
UAX N36 H34 SING N N 80 
UAX C13 H35 SING N N 81 
UAX C13 H36 SING N N 82 
UAX C28 H37 SING N N 83 
UAX C26 H38 SING N N 84 
UAX C25 H39 SING N N 85 
UAX C23 H40 SING N N 86 
UAX C15 H41 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UAX InChI            InChI                1.06  "InChI=1S/C31H41N5O7/c1-31(2,3)43-30(42)35-22-10-7-15-36(29(22)41)24(16-19-11-12-19)27(39)34-23(17-21-13-14-32-26(21)38)25(37)28(40)33-18-20-8-5-4-6-9-20/h4-10,15,19,21,23-25,37H,11-14,16-18H2,1-3H3,(H,32,38)(H,33,40)(H,34,39)(H,35,42)/t21-,23+,24+,25+/m1/s1" 
UAX InChIKey         InChI                1.06  FRACPXUHUTXLCX-VZVHPENPSA-N                                                                                                                                                                                                                                         
UAX SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)OC(=O)NC1=CC=CN([C@@H](CC2CC2)C(=O)N[C@@H](C[C@H]3CCNC3=O)[C@H](O)C(=O)NCc4ccccc4)C1=O"                                                                                                                                                                    
UAX SMILES           CACTVS               3.385 "CC(C)(C)OC(=O)NC1=CC=CN([CH](CC2CC2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)C(=O)NCc4ccccc4)C1=O"                                                                                                                                                                          
UAX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC=CN(C1=O)[C@@H](CC2CC2)C(=O)N[C@@H](C[C@H]3CCNC3=O)[C@@H](C(=O)NCc4ccccc4)O"                                                                                                                                                                   
UAX SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC=CN(C1=O)C(CC2CC2)C(=O)NC(CC3CCNC3=O)C(C(=O)NCc4ccccc4)O"                                                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           UAX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{S})-3-oxidanyl-4-oxidanylidene-1-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 UAX "(S,S,R)-13b"                     AUTHOR ? 
2 UAX "ketoamide inhibitor 13b (bound)" AUTHOR ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UAX "Create component"   2023-01-31 PDBE 
UAX "Modify synonyms"    2023-08-13 PDBE 
UAX "Modify coordinates" 2023-08-13 PDBE 
UAX "Modify name"        2023-08-13 PDBE 
UAX "Initial release"    2024-08-07 RCSB 
UAX "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            UAX 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C57 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
