data_DMY
#

_chem_comp.id                                   DMY
_chem_comp.name                                 "DISTAMYCIN A"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C22 H27 N9 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "DISTAMYCIN; STALLIMYCIN"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       481.508
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DMY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       217D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DMY  C1    C1    C  0  1  N  N  N  10.426  -3.194  19.552  -1.576  -0.244    9.706  C1    DMY   1  
DMY  O1    O1    O  0  1  N  N  N  11.033  -3.535  20.574  -2.291  -0.331    8.730  O1    DMY   2  
DMY  N1    N1    N  0  1  N  N  N  10.842  -2.385  18.562  -0.254  -0.027    9.556  N1    DMY   3  
DMY  C2    C2    C  0  1  Y  N  N  12.040  -1.777  18.485   0.295   0.099    8.267  C2    DMY   4  
DMY  C3    C3    C  0  1  Y  N  N  12.456  -0.954  17.441  -0.407   0.022    7.057  C3    DMY   5  
DMY  C4    C4    C  0  1  Y  N  N  13.747  -0.534  17.674   0.508   0.205    6.043  C4    DMY   6  
DMY  N2    N2    N  0  1  Y  N  N  14.158  -1.084  18.850   1.743   0.381    6.623  N2    DMY   7  
DMY  C5    C5    C  0  1  Y  N  N  13.163  -1.829  19.365   1.604   0.319    7.973  C5    DMY   8  
DMY  C6    C6    C  0  1  N  N  N  15.517  -0.993  19.543   3.000   0.606    5.904  C6    DMY   9  
DMY  C7    C7    C  0  1  N  N  N  14.589   0.260  16.806   0.219   0.204    4.605  C7    DMY  10  
DMY  O2    O2    O  0  1  N  N  N  15.810   0.253  16.903   1.130   0.280    3.801  O2    DMY  11  
DMY  N3    N3    N  0  1  N  N  N  13.899   1.035  15.923  -1.054   0.118    4.173  N3    DMY  12  
DMY  C8    C8    C  0  1  Y  N  N  14.493   1.745  14.929  -1.324   0.000    2.798  C8    DMY  13  
DMY  C9    C9    C  0  1  Y  N  N  13.842   2.565  14.016  -0.372  -0.033    1.768  C9    DMY  14  
DMY  C10   C10   C  0  1  Y  N  N  14.757   3.124  13.161  -1.063  -0.160    0.582  C10   DMY  15  
DMY  N4    N4    N  0  1  Y  N  N  15.977   2.647  13.490  -2.406  -0.192    0.881  N4    DMY  16  
DMY  C11   C11   C  0  1  Y  N  N  15.856   1.816  14.535  -2.554  -0.093    2.228  C11   DMY  17  
DMY  C12   C12   C  0  1  N  N  N  17.339   2.967  12.865  -3.495  -0.311   -0.090  C12   DMY  18  
DMY  C13   C13   C  0  1  N  N  N  14.495   3.963  12.013  -0.474  -0.240   -0.758  C13   DMY  19  
DMY  O3    O3    O  0  1  N  N  N  15.286   4.061  11.080  -1.193  -0.253   -1.740  O3    DMY  20  
DMY  N5    N5    N  0  1  N  N  N  13.321   4.657  12.093   0.864  -0.298   -0.903  N5    DMY  21  
DMY  C14   C14   C  0  1  Y  N  N  12.801   5.408  11.082   1.435  -0.258   -2.188  C14   DMY  22  
DMY  C15   C15   C  0  1  Y  N  N  11.625   6.140  11.134   0.736  -0.165   -3.400  C15   DMY  23  
DMY  C16   C16   C  0  1  Y  N  N  11.407   6.754   9.911   1.676  -0.152   -4.410  C16   DMY  24  
DMY  N6    N6    N  0  1  Y  N  N  12.412   6.390   9.079   2.918  -0.244   -3.825  N6    DMY  25  
DMY  C17   C17   C  0  1  Y  N  N  13.267   5.603   9.748   2.762  -0.308   -2.477  C17   DMY  26  
DMY  C18   C18   C  0  1  N  N  N  12.586   6.715   7.558   4.198  -0.270   -4.539  C18   DMY  27  
DMY  C19   C19   C  0  1  N  N  N  10.281   7.545   9.489   1.400  -0.062   -5.847  C19   DMY  28  
DMY  O4    O4    O  0  1  N  N  N   9.882   7.634   8.320   2.311  -0.155   -6.648  O4    DMY  29  
DMY  N7    N7    N  0  1  N  N  N   9.686   8.235  10.477   0.138   0.123   -6.281  N7    DMY  30  
DMY  C20   C20   C  0  1  N  N  N   8.517   9.077  10.244  -0.153   0.101   -7.716  C20   DMY  31  
DMY  C21   C21   C  0  1  N  N  N   7.214   8.320  10.206  -1.649   0.336   -7.936  C21   DMY  32  
DMY  C22   C22   C  0  1  N  N  N   6.035   9.213   9.857  -1.949   0.314   -9.413  C22   DMY  33  
DMY  N8    N8    N  0  1  N  N  N   5.744   9.542   8.598  -0.996   0.117  -10.264  N8    DMY  34  
DMY  N9    N9    N  0  1  N  N  N   5.292   9.675  10.860  -3.233   0.503   -9.854  N9    DMY  35  
DMY  H1    H1    H  0  1  N  N  N   9.423  -3.652  19.520  -1.998  -0.341   10.695  H1    DMY  36  
DMY  HN1   HN1   H  0  1  N  N  N  10.187  -2.216  17.797   0.317   0.042   10.337  HN1   DMY  37  
DMY  H3    H3    H  0  1  N  N  N  11.852  -0.676  16.560  -1.468  -0.145    6.941  H3    DMY  38  
DMY  H5    H5    H  0  1  N  N  N  13.250  -2.374  20.319   2.401   0.426    8.693  H5    DMY  39  
DMY  H61   1H6   H  0  1  N  N  N  15.853  -1.443  20.505   3.515  -0.344    5.766  H61   DMY  40  
DMY  H62   2H6   H  0  1  N  N  N  16.256  -1.338  18.783   2.788   1.049    4.931  H62   DMY  41  
DMY  H63   3H6   H  0  1  N  N  N  15.722   0.098  19.642   3.632   1.281    6.480  H63   DMY  42  
DMY  HN3   HN3   H  0  1  N  N  N  12.884   1.086  16.010  -1.784   0.137    4.811  HN3   DMY  43  
DMY  H9    H9    H  0  1  N  N  N  12.754   2.746  13.975   0.699   0.021    1.884  H9    DMY  44  
DMY  H11   H11   H  0  1  N  N  N  16.714   1.290  14.985  -3.495  -0.091    2.759  H11   DMY  45  
DMY  H121  1H12  H  0  0  N  N  N  18.346   2.573  13.136  -3.861   0.682   -0.350  H121  DMY  46  
DMY  H122  2H12  H  0  0  N  N  N  17.222   2.755  11.776  -3.128  -0.809   -0.988  H122  DMY  47  
DMY  H123  3H12  H  0  0  N  N  N  17.432   4.077  12.912  -4.307  -0.895    0.342  H123  DMY  48  
DMY  HN5   HN5   H  0  1  N  N  N  12.797   4.611  12.967   1.434  -0.368   -0.121  HN5   DMY  49  
DMY  H15   H15   H  0  1  N  N  N  10.964   6.221  12.013  -0.334  -0.107   -3.520  H15   DMY  50  
DMY  H17   H17   H  0  1  N  N  N  14.181   5.193   9.287   3.561  -0.385   -1.754  H17   DMY  51  
DMY  H181  1H18  H  0  0  N  N  N  13.413   6.415   6.873   4.418  -1.291   -4.852  H181  DMY  52  
DMY  H182  2H18  H  0  0  N  N  N  11.649   6.360   7.067   4.138   0.373   -5.416  H182  DMY  53  
DMY  H183  3H18  H  0  0  N  N  N  12.521   7.825   7.480   4.989   0.086   -3.879  H183  DMY  54  
DMY  HN7   HN7   H  0  1  N  N  N  10.117   8.120  11.394  -0.577   0.270   -5.643  HN7   DMY  55  
DMY  H201  1H20  H  0  0  N  N  N   8.470   9.898  10.996   0.414   0.887   -8.214  H201  DMY  56  
DMY  H202  2H20  H  0  0  N  N  N   8.647   9.679   9.314   0.127  -0.866   -8.130  H202  DMY  57  
DMY  H211  1H21  H  0  0  N  N  N   7.276   7.447   9.514  -2.217  -0.449   -7.438  H211  DMY  58  
DMY  H212  2H21  H  0  0  N  N  N   7.036   7.776  11.163  -1.930   1.304   -7.523  H212  DMY  59  
DMY  HN8   HN8   H  0  1  N  N  N   5.850   9.860   9.561  -1.189   0.103  -11.214  HN8   DMY  60  
DMY  HN91  1HN9  H  0  0  N  N  N   4.500  10.274  10.625  -3.426   0.489  -10.804  HN91  DMY  61  
DMY  HN92  2HN9  H  0  0  N  N  N   5.892  10.156  11.529  -3.948   0.650   -9.216  HN92  DMY  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DMY  C1   O1    DOUB  N  N   1  
DMY  C1   N1    SING  N  N   2  
DMY  C1   H1    SING  N  N   3  
DMY  N1   C2    SING  N  N   4  
DMY  N1   HN1   SING  N  N   5  
DMY  C2   C3    SING  Y  N   6  
DMY  C2   C5    DOUB  Y  N   7  
DMY  C3   C4    DOUB  Y  N   8  
DMY  C3   H3    SING  N  N   9  
DMY  C4   N2    SING  Y  N  10  
DMY  C4   C7    SING  N  N  11  
DMY  N2   C5    SING  Y  N  12  
DMY  N2   C6    SING  N  N  13  
DMY  C5   H5    SING  N  N  14  
DMY  C6   H61   SING  N  N  15  
DMY  C6   H62   SING  N  N  16  
DMY  C6   H63   SING  N  N  17  
DMY  C7   O2    DOUB  N  N  18  
DMY  C7   N3    SING  N  N  19  
DMY  N3   C8    SING  N  N  20  
DMY  N3   HN3   SING  N  N  21  
DMY  C8   C9    SING  Y  N  22  
DMY  C8   C11   DOUB  Y  N  23  
DMY  C9   C10   DOUB  Y  N  24  
DMY  C9   H9    SING  N  N  25  
DMY  C10  N4    SING  Y  N  26  
DMY  C10  C13   SING  N  N  27  
DMY  N4   C11   SING  Y  N  28  
DMY  N4   C12   SING  N  N  29  
DMY  C11  H11   SING  N  N  30  
DMY  C12  H121  SING  N  N  31  
DMY  C12  H122  SING  N  N  32  
DMY  C12  H123  SING  N  N  33  
DMY  C13  O3    DOUB  N  N  34  
DMY  C13  N5    SING  N  N  35  
DMY  N5   C14   SING  N  N  36  
DMY  N5   HN5   SING  N  N  37  
DMY  C14  C15   SING  Y  N  38  
DMY  C14  C17   DOUB  Y  N  39  
DMY  C15  C16   DOUB  Y  N  40  
DMY  C15  H15   SING  N  N  41  
DMY  C16  N6    SING  Y  N  42  
DMY  C16  C19   SING  N  N  43  
DMY  N6   C17   SING  Y  N  44  
DMY  N6   C18   SING  N  N  45  
DMY  C17  H17   SING  N  N  46  
DMY  C18  H181  SING  N  N  47  
DMY  C18  H182  SING  N  N  48  
DMY  C18  H183  SING  N  N  49  
DMY  C19  O4    DOUB  N  N  50  
DMY  C19  N7    SING  N  N  51  
DMY  N7   C20   SING  N  N  52  
DMY  N7   HN7   SING  N  N  53  
DMY  C20  C21   SING  N  N  54  
DMY  C20  H201  SING  N  N  55  
DMY  C20  H202  SING  N  N  56  
DMY  C21  C22   SING  N  N  57  
DMY  C21  H211  SING  N  N  58  
DMY  C21  H212  SING  N  N  59  
DMY  C22  N8    DOUB  N  N  60  
DMY  C22  N9    SING  N  N  61  
DMY  N8   HN8   SING  N  N  62  
DMY  N9   HN91  SING  N  N  63  
DMY  N9   HN92  SING  N  N  64  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DMY  SMILES            ACDLabs               10.04  "O=C(Nc1cc(C(=O)NCCC(=[N@H])N)n(c1)C)c3cc(NC(=O)c2cc(NC=O)cn2C)cn3C"  
DMY  SMILES_CANONICAL  CACTVS                3.341  "Cn1cc(NC=O)cc1C(=O)Nc2cn(C)c(c2)C(=O)Nc3cn(C)c(c3)C(=O)NCCC(N)=N"  
DMY  SMILES            CACTVS                3.341  "Cn1cc(NC=O)cc1C(=O)Nc2cn(C)c(c2)C(=O)Nc3cn(C)c(c3)C(=O)NCCC(N)=N"  
DMY  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cn1cc(cc1C(=O)Nc2cc(n(c2)C)C(=O)Nc3cc(n(c3)C)C(=O)NCCC(=N)N)NC=O"  
DMY  SMILES            "OpenEye OEToolkits"  1.5.0  "Cn1cc(cc1C(=O)Nc2cc(n(c2)C)C(=O)Nc3cc(n(c3)C)C(=O)NCCC(=N)N)NC=O"  
DMY  InChI             InChI                 1.03   "InChI=1S/C22H27N9O4/c1-29-9-13(26-12-32)6-17(29)21(34)28-15-8-18(31(3)11-15)22(35)27-14-7-16(30(2)10-14)20(33)25-5-4-19(23)24/h6-12H,4-5H2,1-3H3,(H3,23,24)(H,25,33)(H,26,32)(H,27,35)(H,28,34)"  
DMY  InChIKey          InChI                 1.03   UPBAOYRENQEPJO-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DMY  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-[5-({5-[(3-amino-3-iminopropyl)carbamoyl]-1-methyl-1H-pyrrol-3-yl}carbamoyl)-1-methyl-1H-pyrrol-3-yl]-4-(formylamino)-1-methyl-1H-pyrrole-2-carboxamide"  
DMY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "N-[5-[[5-[(3-amino-3-imino-propyl)carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-pyrrol-3-yl]-4-formamido-1-methyl-pyrrole-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DMY  "Create component"   1999-07-08  RCSB  
DMY  "Modify descriptor"  2011-06-04  RCSB  
DMY  "Modify synonyms"    2020-06-05  PDBE  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  DMY  DISTAMYCIN   ?  ?  
2  DMY  STALLIMYCIN  ?  ?  
##
