data_IPY
#

_chem_comp.id                                   IPY
_chem_comp.name                                 "IMIDAZOLE-PYRROLE POLYAMIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C31 H42 N11 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "IMIDAZOLE-PYRROLE-PYRROLE-PYRROLE-BETA ALANINE-DIMETHYLAMINO PROPYLAMIDE"
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       648.736
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    IPY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       408D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IPY  C     C     C  0  1  Y  N  N  10.897  -6.585   6.666   -8.613  -0.641   0.328  C     IPY   1  
IPY  C1    C1    C  0  1  Y  N  N   7.525  -4.186  11.897   -2.086  -0.591   0.012  C1    IPY   2  
IPY  C2    C2    C  0  1  Y  N  N  10.085  -7.658   6.309   -8.437  -1.970   0.553  C2    IPY   3  
IPY  C3    C3    C  0  1  N  N  N   8.073  -8.927   7.158   -6.502  -3.553   0.799  C3    IPY   4  
IPY  C4    C4    C  0  1  Y  N  N   9.273  -6.876   8.224   -6.416  -1.062   0.375  C4    IPY   5  
IPY  C5    C5    C  0  1  N  N  N   8.516  -6.745   9.377   -4.958  -0.911   0.332  C5    IPY   6  
IPY  C6    C6    C  0  1  Y  N  N   7.883  -5.385  11.333   -3.020   0.454   0.063  C6    IPY   7  
IPY  C8    C8    C  0  1  Y  N  N   7.506  -6.397  12.254   -2.340   1.624  -0.061  C8    IPY   8  
IPY  C9    C9    C  0  1  N  N  N   6.396  -6.670  14.455    0.051   2.339  -0.352  C9    IPY   9  
IPY  C10   C10   C  0  1  Y  N  N   6.928  -4.471  13.116   -0.843  -0.017  -0.154  C10   IPY  10  
IPY  C11   C11   C  0  1  N  N  N   6.426  -3.501  14.031    0.433  -0.732  -0.263  C11   IPY  11  
IPY  C12   C12   C  0  1  Y  N  N   5.963  -1.169  14.563    1.675  -2.768  -0.297  C12   IPY  12  
IPY  C13   C13   C  0  1  Y  N  N   6.023   0.203  14.298    2.950  -2.186  -0.244  C13   IPY  13  
IPY  C14   C14   C  0  1  Y  N  N   5.492  -1.279  15.859    1.836  -4.117  -0.340  C14   IPY  14  
IPY  C15   C15   C  0  1  N  N  N   4.744   0.130  17.783    3.753  -5.741  -0.339  C15   IPY  15  
IPY  C16   C16   C  0  1  Y  N  N   5.596   0.884  15.409    3.866  -3.217  -0.247  C16   IPY  16  
IPY  C18   C18   C  0  1  N  N  N   5.466   8.931  15.180   11.211   1.295   0.148  C18   IPY  17  
IPY  C19   C19   C  0  1  N  N  N   4.044   9.383  14.788   11.578   2.766   0.359  C19   IPY  18  
IPY  C20   C20   C  0  1  N  N  N   3.859  10.451  13.664   13.098   2.927   0.295  C20   IPY  19  
IPY  C21   C21   C  0  1  N  N  N   4.574  11.916  11.794   14.911   4.476   0.556  C21   IPY  20  
IPY  C22   C22   C  0  1  N  N  N   5.924  11.834  13.868   12.926   5.139  -0.617  C22   IPY  21  
IPY  C23   C23   C  0  1  N  N  N   5.517   2.291  15.535    5.325  -3.078  -0.198  C23   IPY  22  
IPY  C24   C24   C  0  1  N  N  N  12.521  -6.416   4.788   -9.877   1.356   0.003  C24   IPY  23  
IPY  C25   C25   C  0  1  Y  N  N  13.716  -5.775   4.268  -11.170   2.056  -0.102  C25   IPY  24  
IPY  C26   C26   C  0  1  Y  N  N  15.492  -4.431   4.086  -13.294   2.435  -0.143  C26   IPY  25  
IPY  C27   C27   C  0  1  Y  N  N  15.483  -5.222   2.966  -12.679   3.626  -0.347  C27   IPY  26  
IPY  C28   C28   C  0  1  N  N  N  14.104  -7.048   1.974  -10.280   4.390  -0.494  C28   IPY  27  
IPY  C29   C29   C  0  1  N  N  N   5.436   4.504  14.303    7.337  -1.706  -0.099  C29   IPY  28  
IPY  C30   C30   C  0  1  N  N  N   6.714   5.285  14.531    7.703  -0.236   0.113  C30   IPY  29  
IPY  C31   C31   C  0  1  N  N  N   6.719   6.813  14.658    9.200  -0.077   0.049  C31   IPY  30  
IPY  C32   C32   C  0  1  Y  N  N  10.370  -6.099   7.880   -7.344  -0.056   0.208  C32   IPY  31  
IPY  O1    O1    O  0  1  N  N  N   7.856  -7.746   9.737   -4.242  -1.893   0.398  O1    IPY  32  
IPY  O2    O2    O  0  1  N  N  N   6.061  -3.917  15.172    1.477  -0.108  -0.310  O2    IPY  33  
IPY  O3    O3    O  0  1  N  N  N   5.460   2.775  16.668    6.034  -4.062  -0.301  O3    IPY  34  
IPY  O4    O4    O  0  1  N  N  N  11.950  -7.293   4.103   -8.838   1.977  -0.115  O4    IPY  35  
IPY  O5    O5    O  0  1  N  N  N   7.724   7.426  14.393    9.905  -1.044  -0.146  O5    IPY  36  
IPY  N     N     N  0  1  Y  N  N   9.088  -7.847   7.253   -7.105  -2.235   0.582  N     IPY  37  
IPY  N1    N1    N  0  1  N  N  N   8.560  -5.591  10.093   -4.411   0.316   0.220  N1    IPY  38  
IPY  N3    N3    N  0  1  Y  N  N   6.908  -5.843  13.333   -1.016   1.348  -0.194  N3    IPY  39  
IPY  N4    N4    N  0  1  N  N  N   6.382  -2.195  13.689    0.449  -2.078  -0.310  N4    IPY  40  
IPY  N5    N5    N  0  1  Y  N  N   5.250  -0.040  16.406    3.165  -4.399  -0.310  N5    IPY  41  
IPY  N6    N6    N  0  1  N  N  N   5.614   7.468  15.032    9.756   1.141   0.209  N6    IPY  42  
IPY  N7    N7    N  1  1  N  N  N   4.998  11.136  12.975   13.449   4.339   0.498  N7    IPY  43  
IPY  N8    N8    N  0  1  N  N  N  12.026  -6.043   6.004   -9.846   0.027   0.229  N8    IPY  44  
IPY  N9    N9    N  0  1  Y  N  N  14.389  -6.065   3.052  -11.340   3.395  -0.319  N9    IPY  45  
IPY  N10   N10   N  0  1  Y  N  N  14.402  -4.773   4.894  -12.358   1.500   0.006  N10   IPY  46  
IPY  N11   N11   N  0  1  N  N  N   5.541   3.043  14.426    5.881  -1.861  -0.037  N11   IPY  47  
IPY  H1    H1    H  0  1  N  N  N   7.685  -3.187  11.456   -2.301  -1.647   0.083  H1    IPY  48  
IPY  H2    H2    H  0  1  N  N  N  10.213  -8.273   5.402   -9.226  -2.695   0.686  H2    IPY  49  
IPY  H31   1H3   H  0  1  N  N  N   7.270  -9.079   7.917   -6.438  -4.084  -0.150  H31   IPY  50  
IPY  H32A  2H3   H  0  0  N  N  N   7.576  -8.829   6.164   -5.502  -3.430   1.215  H32A  IPY  51  
IPY  H33   3H3   H  0  1  N  N  N   8.622  -9.891   7.057   -7.117  -4.124   1.495  H33   IPY  52  
IPY  H8    H8    H  0  1  N  N  N   7.659  -7.483  12.144   -2.779   2.610  -0.056  H8    IPY  53  
IPY  H91   1H9   H  0  1  N  N  N   5.902  -6.213  15.344    0.371   2.688   0.629  H91   IPY  54  
IPY  H92   2H9   H  0  1  N  N  N   5.697  -7.427  14.029    0.896   1.884  -0.869  H92   IPY  55  
IPY  H93   3H9   H  0  1  N  N  N   7.235  -7.307  14.819   -0.320   3.182  -0.935  H93   IPY  56  
IPY  H13   H13   H  0  1  N  N  N   6.355   0.675  13.358    3.172  -1.130  -0.202  H13   IPY  57  
IPY  H14   H14   H  0  1  N  N  N   5.330  -2.232  16.388    1.039  -4.844  -0.389  H14   IPY  58  
IPY  H151  1H15  H  0  0  N  N  N   4.547   1.134  18.226    4.016  -5.999  -1.365  H151  IPY  59  
IPY  H152  2H15  H  0  0  N  N  N   3.807  -0.468  17.875    4.649  -5.758   0.281  H152  IPY  60  
IPY  H153  3H15  H  0  0  N  N  N   5.438  -0.411  18.467    3.032  -6.462   0.044  H153  IPY  61  
IPY  H181  1H18  H  0  0  N  N  N   6.246   9.484  14.607   11.674   0.690   0.927  H181  IPY  62  
IPY  H182  2H18  H  0  0  N  N  N   5.737   9.270  16.206   11.571   0.968  -0.828  H182  IPY  63  
IPY  H191  1H19  H  0  0  N  N  N   3.444   8.481  14.523   11.115   3.371  -0.420  H191  IPY  64  
IPY  H192  2H19  H  0  0  N  N  N   3.517   9.736  15.705   11.218   3.093   1.335  H192  IPY  65  
IPY  H201  1H20  H  0  0  N  N  N   3.224   9.989  12.871   13.561   2.321   1.074  H201  IPY  66  
IPY  H202  2H20  H  0  0  N  N  N   3.194  11.247  14.072   13.457   2.600  -0.681  H202  IPY  67  
IPY  H211  1H21  H  0  0  N  N  N   5.422  12.426  11.280   15.346   4.124  -0.380  H211  IPY  68  
IPY  H212  2H21  H  0  0  N  N  N   4.002  11.278  11.079   15.172   5.523   0.706  H212  IPY  69  
IPY  H213  3H21  H  0  0  N  N  N   3.775  12.646  12.064   15.299   3.882   1.383  H213  IPY  70  
IPY  H221  1H22  H  0  0  N  N  N   6.772  12.344  13.354   13.361   4.787  -1.553  H221  IPY  71  
IPY  H222  2H22  H  0  0  N  N  N   5.369  12.557  14.510   11.842   5.037  -0.660  H222  IPY  72  
IPY  H223  3H22  H  0  0  N  N  N   6.307  11.136  14.648   13.187   6.186  -0.466  H223  IPY  73  
IPY  H26   H26   H  0  1  N  N  N  16.245  -3.654   4.299  -14.361   2.273  -0.107  H26   IPY  74  
IPY  H27   H27   H  0  1  N  N  N  16.220  -5.186   2.146  -13.163   4.580  -0.502  H27   IPY  75  
IPY  H281  1H28  H  0  0  N  N  N  14.632  -7.275   1.019  -10.008   4.807   0.476  H281  IPY  76  
IPY  H282  2H28  H  0  0  N  N  N  14.042  -8.029   2.499   -9.407   3.916  -0.943  H282  IPY  77  
IPY  H283  3H28  H  0  0  N  N  N  13.054  -6.829   1.667  -10.635   5.189  -1.145  H283  IPY  78  
IPY  H291  1H29  H  0  0  N  N  N   4.635   4.883  14.979    7.800  -2.311   0.680  H291  IPY  79  
IPY  H292  2H29  H  0  0  N  N  N   5.002   4.769  13.310    7.696  -2.033  -1.075  H292  IPY  80  
IPY  H301  1H30  H  0  0  N  N  N   7.211   4.866  15.437    7.240   0.370  -0.667  H301  IPY  81  
IPY  H302  2H30  H  0  0  N  N  N   7.430   5.008  13.722    7.344   0.092   1.088  H302  IPY  82  
IPY  H32   H32   H  0  1  N  N  N  10.754  -5.247   8.466   -7.133   0.988   0.026  H32   IPY  83  
IPY  HN1   HN1   H  0  1  N  N  N   9.125  -4.847   9.682   -4.976   1.103   0.248  HN1   IPY  84  
IPY  HN4   HN4   H  0  1  N  N  N   6.675  -1.975  12.737   -0.385  -2.572  -0.352  HN4   IPY  85  
IPY  HN6   HN6   H  0  1  N  N  N   4.847   6.820  15.213    9.192   1.914   0.365  HN6   IPY  86  
IPY  HN7   HN7   H  0  1  N  N  N   5.571  10.380  12.600   13.046   4.664   1.364  HN7   IPY  87  
IPY  HN8   HN8   H  0  1  N  N  N  12.546  -5.292   6.458  -10.675  -0.468   0.323  HN8   IPY  88  
IPY  H11   H11   H  0  1  N  N  N   5.648   2.450  13.602    5.317  -1.087   0.119  H11   IPY  89  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IPY  C    C2    DOUB  Y  N   1  
IPY  C    C32   SING  Y  N   2  
IPY  C    N8    SING  N  N   3  
IPY  C1   C6    SING  Y  N   4  
IPY  C1   C10   DOUB  Y  N   5  
IPY  C1   H1    SING  N  N   6  
IPY  C2   N     SING  Y  N   7  
IPY  C2   H2    SING  N  N   8  
IPY  C3   N     SING  N  N   9  
IPY  C3   H31   SING  N  N  10  
IPY  C3   H32A  SING  N  N  11  
IPY  C3   H33   SING  N  N  12  
IPY  C4   C5    SING  N  N  13  
IPY  C4   C32   DOUB  Y  N  14  
IPY  C4   N     SING  Y  N  15  
IPY  C5   O1    DOUB  N  N  16  
IPY  C5   N1    SING  N  N  17  
IPY  C6   C8    DOUB  Y  N  18  
IPY  C6   N1    SING  N  N  19  
IPY  C8   N3    SING  Y  N  20  
IPY  C8   H8    SING  N  N  21  
IPY  C9   N3    SING  N  N  22  
IPY  C9   H91   SING  N  N  23  
IPY  C9   H92   SING  N  N  24  
IPY  C9   H93   SING  N  N  25  
IPY  C10  C11   SING  N  N  26  
IPY  C10  N3    SING  Y  N  27  
IPY  C11  O2    DOUB  N  N  28  
IPY  C11  N4    SING  N  N  29  
IPY  C12  C13   SING  Y  N  30  
IPY  C12  C14   DOUB  Y  N  31  
IPY  C12  N4    SING  N  N  32  
IPY  C13  C16   DOUB  Y  N  33  
IPY  C13  H13   SING  N  N  34  
IPY  C14  N5    SING  Y  N  35  
IPY  C14  H14   SING  N  N  36  
IPY  C15  N5    SING  N  N  37  
IPY  C15  H151  SING  N  N  38  
IPY  C15  H152  SING  N  N  39  
IPY  C15  H153  SING  N  N  40  
IPY  C16  C23   SING  N  N  41  
IPY  C16  N5    SING  Y  N  42  
IPY  C18  C19   SING  N  N  43  
IPY  C18  N6    SING  N  N  44  
IPY  C18  H181  SING  N  N  45  
IPY  C18  H182  SING  N  N  46  
IPY  C19  C20   SING  N  N  47  
IPY  C19  H191  SING  N  N  48  
IPY  C19  H192  SING  N  N  49  
IPY  C20  N7    SING  N  N  50  
IPY  C20  H201  SING  N  N  51  
IPY  C20  H202  SING  N  N  52  
IPY  C21  N7    SING  N  N  53  
IPY  C21  H211  SING  N  N  54  
IPY  C21  H212  SING  N  N  55  
IPY  C21  H213  SING  N  N  56  
IPY  C22  N7    SING  N  N  57  
IPY  C22  H221  SING  N  N  58  
IPY  C22  H222  SING  N  N  59  
IPY  C22  H223  SING  N  N  60  
IPY  C23  O3    DOUB  N  N  61  
IPY  C23  N11   SING  N  N  62  
IPY  C24  C25   SING  N  N  63  
IPY  C24  O4    DOUB  N  N  64  
IPY  C24  N8    SING  N  N  65  
IPY  C25  N9    SING  Y  N  66  
IPY  C25  N10   DOUB  Y  N  67  
IPY  C26  C27   DOUB  Y  N  68  
IPY  C26  N10   SING  Y  N  69  
IPY  C26  H26   SING  N  N  70  
IPY  C27  N9    SING  Y  N  71  
IPY  C27  H27   SING  N  N  72  
IPY  C28  N9    SING  N  N  73  
IPY  C28  H281  SING  N  N  74  
IPY  C28  H282  SING  N  N  75  
IPY  C28  H283  SING  N  N  76  
IPY  C29  C30   SING  N  N  77  
IPY  C29  N11   SING  N  N  78  
IPY  C29  H291  SING  N  N  79  
IPY  C29  H292  SING  N  N  80  
IPY  C30  C31   SING  N  N  81  
IPY  C30  H301  SING  N  N  82  
IPY  C30  H302  SING  N  N  83  
IPY  C31  O5    DOUB  N  N  84  
IPY  C31  N6    SING  N  N  85  
IPY  C32  H32   SING  N  N  86  
IPY  N1   HN1   SING  N  N  87  
IPY  N4   HN4   SING  N  N  88  
IPY  N6   HN6   SING  N  N  89  
IPY  N7   HN7   SING  N  N  90  
IPY  N8   HN8   SING  N  N  91  
IPY  N11  H11   SING  N  N  92  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IPY  SMILES            ACDLabs               10.04  "O=C(Nc3cc(C(=O)Nc2cc(C(=O)Nc1cc(C(=O)NCCC(=O)NCCC[NH+](C)C)n(c1)C)n(c2)C)n(c3)C)c4nccn4C"  
IPY  SMILES_CANONICAL  CACTVS                3.341  "Cn1ccnc1C(=O)Nc2cn(C)c(c2)C(=O)Nc3cn(C)c(c3)C(=O)Nc4cn(C)c(c4)C(=O)NCCC(=O)NCCC[NH+](C)C"  
IPY  SMILES            CACTVS                3.341  "Cn1ccnc1C(=O)Nc2cn(C)c(c2)C(=O)Nc3cn(C)c(c3)C(=O)Nc4cn(C)c(c4)C(=O)NCCC(=O)NCCC[NH+](C)C"  
IPY  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cn1ccnc1C(=O)Nc2cc(n(c2)C)C(=O)Nc3cc(n(c3)C)C(=O)Nc4cc(n(c4)C)C(=O)NCCC(=O)NCCC[NH+](C)C"  
IPY  SMILES            "OpenEye OEToolkits"  1.5.0  "Cn1ccnc1C(=O)Nc2cc(n(c2)C)C(=O)Nc3cc(n(c3)C)C(=O)Nc4cc(n(c4)C)C(=O)NCCC(=O)NCCC[NH+](C)C"  
IPY  InChI             InChI                 1.03   "InChI=1S/C31H41N11O5/c1-38(2)12-7-9-32-26(43)8-10-34-28(44)23-14-20(17-40(23)4)35-29(45)24-15-21(18-41(24)5)36-30(46)25-16-22(19-42(25)6)37-31(47)27-33-11-13-39(27)3/h11,13-19H,7-10,12H2,1-6H3,(H,32,43)(H,34,44)(H,35,45)(H,36,46)(H,37,47)/p+1"  
IPY  InChIKey          InChI                 1.03   NCFLEKZHRQALKT-UHFFFAOYSA-O  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
IPY  "SYSTEMATIC NAME"  ACDLabs               10.04  "N,N-dimethyl-3-({N-[(1-methyl-4-{[(1-methyl-4-{[(1-methyl-4-{[(1-methyl-1H-imidazol-2-yl)carbonyl]amino}-1H-pyrrol-2-yl)carbonyl]amino}-1H-pyrrol-2-yl)carbonyl]amino}-1H-pyrrol-2-yl)carbonyl]-beta-alanyl}amino)propan-1-aminium"  
IPY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "dimethyl-[3-[3-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]propyl]azanium"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IPY  "Create component"   1999-07-08  RCSB  
IPY  "Modify descriptor"  2011-06-04  RCSB  
IPY  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     IPY
_pdbx_chem_comp_synonyms.name        "IMIDAZOLE-PYRROLE-PYRROLE-PYRROLE-BETA ALANINE-DIMETHYLAMINO PROPYLAMIDE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
