data_IXY
# 
_chem_comp.id                                    IXY 
_chem_comp.name                                  "N-benzyl-2-({N-[2-(1H-indol-3-yl)ethyl]glycyl}amino)-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H30 N4 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-09-29 
_chem_comp.pdbx_modified_date                    2015-07-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        486.628 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IXY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WZ7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IXY C1  C1  C 0 1 N N N 48.399 11.348 9.518  4.485   4.335  -0.928 C1  IXY 1  
IXY C2  C2  C 0 1 Y N N 47.600 10.091 9.290  3.671   3.147  -0.453 C2  IXY 2  
IXY C3  C3  C 0 1 Y N N 46.114 9.857  9.078  4.171   2.121  0.246  C3  IXY 3  
IXY C4  C4  C 0 1 N N N 45.423 11.226 9.123  5.632   2.016  0.655  C4  IXY 4  
IXY C5  C5  C 0 1 N N N 46.152 12.350 9.847  6.452   2.987  -0.197 C5  IXY 5  
IXY C6  C6  C 0 1 N N N 47.531 12.567 9.258  5.802   4.372  -0.148 C6  IXY 6  
IXY S7  S7  S 0 1 Y N N 48.102 8.525  9.196  1.953   2.927  -0.740 S7  IXY 7  
IXY C8  C8  C 0 1 Y N N 46.939 7.430  8.938  1.921   1.441  0.091  C8  IXY 8  
IXY C9  C9  C 0 1 Y N N 45.736 8.375  8.879  3.163   1.126  0.566  C9  IXY 9  
IXY C10 C10 C 0 1 N N N 44.474 7.587  8.641  3.450   -0.096 1.324  C10 IXY 10 
IXY O11 O11 O 0 1 N N N 43.565 7.681  9.470  3.353   -0.096 2.537  O11 IXY 11 
IXY N12 N12 N 0 1 N N N 44.353 6.883  7.514  3.819   -1.219 0.677  N12 IXY 12 
IXY C13 C13 C 0 1 N N N 43.164 6.120  7.148  4.106   -2.440 1.435  C13 IXY 13 
IXY C14 C14 C 0 1 Y N N 42.090 7.088  6.670  4.494   -3.542 0.483  C14 IXY 14 
IXY C15 C15 C 0 1 Y N N 42.428 8.361  6.232  5.820   -3.722 0.138  C15 IXY 15 
IXY C16 C16 C 0 1 Y N N 41.430 9.226  5.787  6.176   -4.733 -0.735 C16 IXY 16 
IXY C17 C17 C 0 1 Y N N 40.095 8.834  5.773  5.206   -5.564 -1.262 C17 IXY 17 
IXY C18 C18 C 0 1 Y N N 39.748 7.558  6.193  3.879   -5.385 -0.916 C18 IXY 18 
IXY C19 C19 C 0 1 Y N N 40.748 6.697  6.636  3.524   -4.377 -0.040 C19 IXY 19 
IXY N20 N20 N 0 1 N N N 47.046 6.102  8.817  0.790   0.658  0.262  N20 IXY 20 
IXY C21 C21 C 0 1 N N N 46.757 5.245  9.785  -0.392  1.060  -0.248 C21 IXY 21 
IXY O22 O22 O 0 1 N N N 46.347 5.593  10.878 -0.465  2.106  -0.856 O22 IXY 22 
IXY C23 C23 C 0 1 N N N 46.949 3.784  9.463  -1.621  0.209  -0.061 C23 IXY 23 
IXY N24 N24 N 0 1 N N N 46.194 2.960  10.391 -2.770  0.860  -0.704 N24 IXY 24 
IXY C25 C25 C 0 1 N N N 44.757 2.839  10.233 -3.989  0.057  -0.543 C25 IXY 25 
IXY C26 C26 C 0 1 N N N 44.207 1.855  11.246 -5.161  0.767  -1.224 C26 IXY 26 
IXY C27 C27 C 0 1 Y N N 42.731 1.687  11.018 -6.412  -0.057 -1.058 C27 IXY 27 
IXY C28 C28 C 0 1 Y N N 41.741 2.653  11.186 -6.904  -0.947 -1.935 C28 IXY 28 
IXY N29 N29 N 0 1 Y N N 40.516 2.136  10.887 -8.054  -1.501 -1.441 N29 IXY 29 
IXY C30 C30 C 0 1 Y N N 40.654 0.841  10.522 -8.337  -0.967 -0.204 C30 IXY 30 
IXY C31 C31 C 0 1 Y N N 42.094 0.528  10.599 -7.318  -0.044 0.092  C31 IXY 31 
IXY C32 C32 C 0 1 Y N N 42.578 -0.741 10.286 -7.342  0.655  1.301  C32 IXY 32 
IXY C33 C33 C 0 1 Y N N 41.657 -1.710 9.902  -8.354  0.435  2.192  C33 IXY 33 
IXY C34 C34 C 0 1 Y N N 40.293 -1.423 9.823  -9.360  -0.478 1.906  C34 IXY 34 
IXY C35 C35 C 0 1 Y N N 39.776 -0.159 10.123 -9.361  -1.172 0.716  C35 IXY 35 
IXY H1  H1  H 0 1 N N N 48.756 11.370 10.558 4.694   4.232  -1.993 H1  IXY 36 
IXY H2  H2  H 0 1 N N N 49.261 11.361 8.834  3.928   5.254  -0.750 H2  IXY 37 
IXY H4  H4  H 0 1 N N N 45.263 11.550 8.084  5.736   2.276  1.708  H4  IXY 38 
IXY H5  H5  H 0 1 N N N 44.450 11.090 9.618  5.985   0.998  0.491  H5  IXY 39 
IXY H6  H6  H 0 1 N N N 45.569 13.278 9.751  7.468   3.047  0.195  H6  IXY 40 
IXY H7  H7  H 0 1 N N N 46.252 12.088 10.911 6.479   2.634  -1.228 H7  IXY 41 
IXY H8  H8  H 0 1 N N N 47.992 13.450 9.724  6.472   5.106  -0.598 H8  IXY 42 
IXY H9  H9  H 0 1 N N N 47.444 12.728 8.173  5.604   4.646  0.888  H9  IXY 43 
IXY H11 H11 H 0 1 N N N 45.126 6.878  6.880  3.896   -1.219 -0.290 H11 IXY 44 
IXY H12 H12 H 0 1 N N N 43.411 5.414  6.342  4.925   -2.253 2.129  H12 IXY 45 
IXY H13 H13 H 0 1 N N N 42.798 5.563  8.023  3.218   -2.737 1.993  H13 IXY 46 
IXY H14 H14 H 0 1 N N N 43.460 8.680  6.236  6.578   -3.072 0.550  H14 IXY 47 
IXY H15 H15 H 0 1 N N N 41.697 10.216 5.448  7.212   -4.873 -1.005 H15 IXY 48 
IXY H16 H16 H 0 1 N N N 39.332 9.520  5.437  5.484   -6.354 -1.944 H16 IXY 49 
IXY H17 H17 H 0 1 N N N 38.717 7.237  6.176  3.121   -6.035 -1.328 H17 IXY 50 
IXY H18 H18 H 0 1 N N N 40.481 5.702  6.961  2.488   -4.239 0.234  H18 IXY 51 
IXY H19 H19 H 0 1 N N N 47.363 5.734  7.943  0.848   -0.179 0.749  H19 IXY 52 
IXY H20 H20 H 0 1 N N N 46.600 3.589  8.438  -1.458  -0.769 -0.514 H20 IXY 53 
IXY H21 H21 H 0 1 N N N 48.017 3.533  9.541  -1.821  0.087  1.003  H21 IXY 54 
IXY H22 H22 H 0 1 N N N 46.572 2.036  10.333 -2.902  1.795  -0.347 H22 IXY 55 
IXY H24 H24 H 0 1 N N N 44.289 3.822  10.389 -3.842  -0.922 -0.999 H24 IXY 56 
IXY H25 H25 H 0 1 N N N 44.531 2.482  9.218  -4.206  -0.065 0.518  H25 IXY 57 
IXY H26 H26 H 0 1 N N N 44.711 0.884  11.128 -5.308  1.746  -0.768 H26 IXY 58 
IXY H27 H27 H 0 1 N N N 44.381 2.237  12.263 -4.945  0.889  -2.285 H27 IXY 59 
IXY H28 H28 H 0 1 N N N 41.919 3.668  11.508 -6.458  -1.189 -2.888 H28 IXY 60 
IXY H29 H29 H 0 1 N N N 39.651 2.636  10.931 -8.590  -2.169 -1.896 H29 IXY 61 
IXY H30 H30 H 0 1 N N N 43.633 -0.965 10.340 -6.562  1.366  1.531  H30 IXY 62 
IXY H31 H31 H 0 1 N N N 42.004 -2.704 9.660  -8.372  0.976  3.127  H31 IXY 63 
IXY H32 H32 H 0 1 N N N 39.613 -2.205 9.519  -10.153 -0.641 2.620  H32 IXY 64 
IXY H33 H33 H 0 1 N N N 38.717 0.036  10.046 -10.147 -1.881 0.502  H33 IXY 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IXY C1  C2  SING N N 1  
IXY C1  C6  SING N N 2  
IXY C2  C3  DOUB Y N 3  
IXY C2  S7  SING Y N 4  
IXY C3  C4  SING N N 5  
IXY C3  C9  SING Y N 6  
IXY C4  C5  SING N N 7  
IXY C5  C6  SING N N 8  
IXY S7  C8  SING Y N 9  
IXY C8  C9  DOUB Y N 10 
IXY C8  N20 SING N N 11 
IXY C9  C10 SING N N 12 
IXY C10 O11 DOUB N N 13 
IXY C10 N12 SING N N 14 
IXY N12 C13 SING N N 15 
IXY C13 C14 SING N N 16 
IXY C14 C15 DOUB Y N 17 
IXY C14 C19 SING Y N 18 
IXY C15 C16 SING Y N 19 
IXY C16 C17 DOUB Y N 20 
IXY C17 C18 SING Y N 21 
IXY C18 C19 DOUB Y N 22 
IXY N20 C21 SING N N 23 
IXY C21 O22 DOUB N N 24 
IXY C21 C23 SING N N 25 
IXY C23 N24 SING N N 26 
IXY N24 C25 SING N N 27 
IXY C25 C26 SING N N 28 
IXY C26 C27 SING N N 29 
IXY C27 C28 DOUB Y N 30 
IXY C27 C31 SING Y N 31 
IXY C28 N29 SING Y N 32 
IXY N29 C30 SING Y N 33 
IXY C30 C31 DOUB Y N 34 
IXY C30 C35 SING Y N 35 
IXY C31 C32 SING Y N 36 
IXY C32 C33 DOUB Y N 37 
IXY C33 C34 SING Y N 38 
IXY C34 C35 DOUB Y N 39 
IXY C1  H1  SING N N 40 
IXY C1  H2  SING N N 41 
IXY C4  H4  SING N N 42 
IXY C4  H5  SING N N 43 
IXY C5  H6  SING N N 44 
IXY C5  H7  SING N N 45 
IXY C6  H8  SING N N 46 
IXY C6  H9  SING N N 47 
IXY N12 H11 SING N N 48 
IXY C13 H12 SING N N 49 
IXY C13 H13 SING N N 50 
IXY C15 H14 SING N N 51 
IXY C16 H15 SING N N 52 
IXY C17 H16 SING N N 53 
IXY C18 H17 SING N N 54 
IXY C19 H18 SING N N 55 
IXY N20 H19 SING N N 56 
IXY C23 H20 SING N N 57 
IXY C23 H21 SING N N 58 
IXY N24 H22 SING N N 59 
IXY C25 H24 SING N N 60 
IXY C25 H25 SING N N 61 
IXY C26 H26 SING N N 62 
IXY C26 H27 SING N N 63 
IXY C28 H28 SING N N 64 
IXY N29 H29 SING N N 65 
IXY C32 H30 SING N N 66 
IXY C33 H31 SING N N 67 
IXY C34 H32 SING N N 68 
IXY C35 H33 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IXY SMILES           ACDLabs              12.01 "O=C(c1c4c(sc1NC(=O)CNCCc3c2ccccc2nc3)CCCC4)NCc5ccccc5"                                                                                                                                              
IXY InChI            InChI                1.03  "InChI=1S/C28H30N4O2S/c33-25(18-29-15-14-20-17-30-23-12-6-4-10-21(20)23)32-28-26(22-11-5-7-13-24(22)35-28)27(34)31-16-19-8-2-1-3-9-19/h1-4,6,8-10,12,17,29-30H,5,7,11,13-16,18H2,(H,31,34)(H,32,33)" 
IXY InChIKey         InChI                1.03  XGJXJNNCXIECFE-UHFFFAOYSA-N                                                                                                                                                                          
IXY SMILES_CANONICAL CACTVS               3.385 "O=C(CNCCc1c[nH]c2ccccc12)Nc3sc4CCCCc4c3C(=O)NCc5ccccc5"                                                                                                                                             
IXY SMILES           CACTVS               3.385 "O=C(CNCCc1c[nH]c2ccccc12)Nc3sc4CCCCc4c3C(=O)NCc5ccccc5"                                                                                                                                             
IXY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CNC(=O)c2c3c(sc2NC(=O)CNCCc4c[nH]c5c4cccc5)CCCC3"                                                                                                                                         
IXY SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CNC(=O)c2c3c(sc2NC(=O)CNCCc4c[nH]c5c4cccc5)CCCC3"                                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
IXY "SYSTEMATIC NAME" ACDLabs              12.01 "N-benzyl-2-({N-[2-(1H-indol-3-yl)ethyl]glycyl}amino)-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide"              
IXY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[2-[2-(1H-indol-3-yl)ethylamino]ethanoylamino]-N-(phenylmethyl)-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IXY "Create component" 2014-09-29 PDBJ 
IXY "Initial release"  2015-08-05 RCSB 
# 
