data_KTY
# 
_chem_comp.id                                    KTY 
_chem_comp.name                                  "desferrioxamine B" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H48 N6 O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         
;N~4~-{5-[acetyl(hydroxy)amino]pentyl}-N~1~-[5-({4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoyl}amino)pentyl]-N~1~-hydr
oxybutanediamide
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-01-14 
_chem_comp.pdbx_modified_date                    2022-12-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        560.684 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KTY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6NMH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KTY C4  C1  C 0 1 N N N 11.388 20.640 63.179 -11.268 1.988  0.054  C4  KTY 1  
KTY C14 C2  C 0 1 N N N 15.110 12.073 70.515 1.655   -3.298 -0.269 C14 KTY 2  
KTY C5  C3  C 0 1 N N N 11.550 19.699 64.361 -10.484 0.945  0.852  C5  KTY 3  
KTY C6  C4  C 0 1 N N N 12.680 18.688 64.254 -9.142  0.681  0.166  C6  KTY 4  
KTY C11 C5  C 0 1 N N N 12.250 14.279 69.381 -2.781  -3.067 0.285  C11 KTY 5  
KTY C7  C6  C 0 1 N N N 13.475 18.587 65.537 -8.358  -0.362 0.965  C7  KTY 6  
KTY C8  C7  C 0 1 N N N 13.267 17.472 67.711 -6.209  -1.504 0.837  C8  KTY 7  
KTY C9  C8  C 0 1 N N N 13.203 15.982 67.875 -4.887  -1.764 0.162  C9  KTY 8  
KTY C10 C9  C 0 1 N N N 11.991 15.549 68.625 -4.103  -2.807 0.960  C10 KTY 9  
KTY C12 C10 C 0 1 N N N 13.165 13.364 71.540 -0.632  -4.209 0.157  C12 KTY 10 
KTY C13 C11 C 0 1 N N N 14.635 12.973 71.643 0.312   -3.034 0.416  C13 KTY 11 
KTY N1  N1  N 0 1 N N N 13.360 22.121 63.689 -13.361 3.251  -0.025 N1  KTY 12 
KTY N2  N2  N 0 1 N N N 12.718 17.944 66.594 -7.073  -0.615 0.308  N2  KTY 13 
KTY C3  C12 C 0 1 N N N 12.677 21.295 62.665 -12.610 2.252  0.739  C3  KTY 14 
KTY N3  N3  N 0 1 N N N 12.943 14.420 70.544 -1.917  -3.957 0.814  N3  KTY 15 
KTY C1  C13 C 0 1 N N N 12.946 24.195 62.506 -14.726 3.934  -1.972 C1  KTY 16 
KTY C2  C14 C 0 1 N N N 13.547 23.457 63.657 -13.953 2.906  -1.186 C2  KTY 17 
KTY O1  O1  O 0 1 N N N 14.189 24.055 64.522 -13.865 1.769  -1.597 O1  KTY 18 
KTY O2  O2  O 0 1 N N N 13.871 18.196 68.503 -6.496  -2.095 1.857  O2  KTY 19 
KTY O3  O3  O 0 1 N N N 11.885 13.209 68.933 -2.494  -2.476 -0.735 O3  KTY 20 
KTY C15 C15 C 0 1 N N N 16.044 10.957 70.946 2.599   -2.122 -0.010 C15 KTY 21 
KTY C16 C16 C 0 1 N N N 17.337 10.878 70.151 3.941   -2.386 -0.696 C16 KTY 22 
KTY N4  N4  N 0 1 N N N 18.318 11.898 70.512 4.846   -1.261 -0.448 N4  KTY 23 
KTY C17 C17 C 0 1 N N N 18.834 12.106 71.735 6.093   -1.274 -0.959 C17 KTY 24 
KTY O4  O4  O 0 1 N N N 18.260 11.715 72.755 6.467   -2.217 -1.623 O4  KTY 25 
KTY C18 C18 C 0 1 N N N 20.192 12.772 71.808 7.024   -0.116 -0.703 C18 KTY 26 
KTY C19 C19 C 0 1 N N N 20.315 14.050 71.000 8.366   -0.380 -1.389 C19 KTY 27 
KTY C20 C20 C 0 1 N N N 21.313 13.961 69.870 9.297   0.777  -1.134 C20 KTY 28 
KTY O5  O5  O 0 1 N N N 21.952 12.948 69.661 8.923   1.720  -0.469 O5  KTY 29 
KTY N5  N5  N 0 1 N N N 21.483 15.083 69.128 10.544  0.765  -1.644 N5  KTY 30 
KTY C21 C21 C 0 1 N N N 21.121 15.192 67.705 11.448  1.890  -1.396 C21 KTY 31 
KTY C22 C22 C 0 1 N N N 21.683 16.456 67.038 11.963  1.823  0.043  C22 KTY 32 
KTY C23 C23 C 0 1 N N N 20.830 17.718 67.151 12.908  2.998  0.302  C23 KTY 33 
KTY C24 C24 C 0 1 N N N 21.233 18.819 66.170 13.422  2.931  1.741  C24 KTY 34 
KTY C25 C25 C 0 1 N N N 20.082 19.707 65.720 14.367  4.106  2.000  C25 KTY 35 
KTY N6  N6  N 0 1 N N N 20.346 21.148 65.782 14.861  4.042  3.382  N6  KTY 36 
KTY O6  O6  O 0 1 N N N 22.070 16.200 69.657 10.980  -0.337 -2.421 O6  KTY 37 
KTY O7  O7  O 0 1 N N N 13.520 15.617 70.910 -2.252  -4.647 2.004  O7  KTY 38 
KTY O8  O8  O 0 1 N N N 13.876 21.428 64.742 -13.465 4.579  0.455  O8  KTY 39 
KTY H1  H1  H 0 1 N N N 10.698 21.443 63.479 -10.696 2.915  0.006  H1  KTY 40 
KTY H2  H2  H 0 1 N N N 10.947 20.067 62.350 -11.443 1.617  -0.956 H2  KTY 41 
KTY H3  H3  H 0 1 N N N 15.638 12.696 69.778 2.093   -4.212 0.131  H3  KTY 42 
KTY H4  H4  H 0 1 N N N 14.226 11.618 70.044 1.499   -3.409 -1.342 H4  KTY 43 
KTY H5  H5  H 0 1 N N N 11.729 20.311 65.257 -10.309 1.316  1.862  H5  KTY 44 
KTY H6  H6  H 0 1 N N N 10.609 19.142 64.480 -11.056 0.018  0.899  H6  KTY 45 
KTY H7  H7  H 0 1 N N N 12.253 17.701 64.023 -9.317  0.310  -0.844 H7  KTY 46 
KTY H8  H8  H 0 1 N N N 13.355 18.995 63.441 -8.570  1.607  0.119  H8  KTY 47 
KTY H9  H9  H 0 1 N N N 14.386 18.001 65.345 -8.183  0.009  1.974  H9  KTY 48 
KTY H10 H10 H 0 1 N N N 13.752 19.600 65.864 -8.930  -1.289 1.012  H10 KTY 49 
KTY H11 H11 H 0 1 N N N 13.188 15.516 66.878 -5.062  -2.135 -0.848 H11 KTY 50 
KTY H12 H12 H 0 1 N N N 14.096 15.647 68.422 -4.315  -0.837 0.114  H12 KTY 51 
KTY H13 H13 H 0 1 N N N 11.707 16.339 69.336 -4.675  -3.734 1.008  H13 KTY 52 
KTY H14 H14 H 0 1 N N N 11.169 15.383 67.914 -3.928  -2.436 1.970  H14 KTY 53 
KTY H15 H15 H 0 1 N N N 12.824 13.725 72.522 -0.788  -4.320 -0.916 H15 KTY 54 
KTY H16 H16 H 0 1 N N N 12.581 12.477 71.253 -0.193  -5.123 0.557  H16 KTY 55 
KTY H17 H17 H 0 1 N N N 14.788 12.445 72.596 0.468   -2.923 1.489  H17 KTY 56 
KTY H18 H18 H 0 1 N N N 15.240 13.892 71.632 -0.126  -2.120 0.016  H18 KTY 57 
KTY H19 H19 H 0 1 N N N 11.729 17.850 66.477 -6.843  -0.142 -0.507 H19 KTY 58 
KTY H20 H20 H 0 1 N N N 13.366 20.502 62.339 -13.182 1.325  0.787  H20 KTY 59 
KTY H21 H21 H 0 1 N N N 12.425 21.938 61.808 -12.436 2.623  1.749  H21 KTY 60 
KTY H22 H22 H 0 1 N N N 13.179 25.266 62.595 -14.057 4.433  -2.673 H22 KTY 61 
KTY H23 H23 H 0 1 N N N 13.361 23.807 61.564 -15.528 3.442  -2.523 H23 KTY 62 
KTY H24 H24 H 0 1 N N N 11.855 24.055 62.511 -15.151 4.669  -1.289 H24 KTY 63 
KTY H25 H25 H 0 1 N N N 15.512 10.001 70.834 2.160   -1.209 -0.410 H25 KTY 64 
KTY H26 H26 H 0 1 N N N 16.300 11.112 72.005 2.755   -2.011 1.063  H26 KTY 65 
KTY H27 H27 H 0 1 N N N 17.095 10.993 69.084 4.380   -3.300 -0.296 H27 KTY 66 
KTY H28 H28 H 0 1 N N N 17.788 9.889  70.320 3.786   -2.498 -1.769 H28 KTY 67 
KTY H29 H29 H 0 1 N N N 18.636 12.499 69.779 4.547   -0.507 0.084  H29 KTY 68 
KTY H30 H30 H 0 1 N N N 20.944 12.059 71.438 6.585   0.798  -1.103 H30 KTY 69 
KTY H31 H31 H 0 1 N N N 20.400 13.011 72.861 7.180   -0.005 0.370  H31 KTY 70 
KTY H32 H32 H 0 1 N N N 20.627 14.859 71.676 8.805   -1.294 -0.989 H32 KTY 71 
KTY H33 H33 H 0 1 N N N 19.329 14.288 70.574 8.210   -0.491 -2.462 H33 KTY 72 
KTY H34 H34 H 0 1 N N N 20.024 15.210 67.623 12.291  1.838  -2.086 H34 KTY 73 
KTY H35 H35 H 0 1 N N N 21.514 14.312 67.175 10.913  2.827  -1.547 H35 KTY 74 
KTY H36 H36 H 0 1 N N N 21.819 16.238 65.968 11.121  1.875  0.733  H36 KTY 75 
KTY H37 H37 H 0 1 N N N 22.660 16.670 67.496 12.499  0.886  0.194  H37 KTY 76 
KTY H38 H38 H 0 1 N N N 20.925 18.112 68.174 13.750  2.946  -0.388 H38 KTY 77 
KTY H39 H39 H 0 1 N N N 19.781 17.447 66.958 12.372  3.935  0.151  H39 KTY 78 
KTY H40 H40 H 0 1 N N N 21.671 18.344 65.280 12.580  2.983  2.431  H40 KTY 79 
KTY H41 H41 H 0 1 N N N 21.989 19.454 66.656 13.958  1.994  1.892  H41 KTY 80 
KTY H42 H42 H 0 1 N N N 19.215 19.492 66.362 15.210  4.054  1.310  H42 KTY 81 
KTY H43 H43 H 0 1 N N N 19.840 19.450 64.678 13.831  5.043  1.849  H43 KTY 82 
KTY H44 H44 H 0 1 N N N 19.539 21.649 65.470 15.306  3.155  3.566  H44 KTY 83 
KTY H45 H45 H 0 1 N N N 20.555 21.408 66.725 15.488  4.808  3.578  H45 KTY 84 
KTY H47 H47 H 0 1 N N N 22.271 16.049 70.573 11.888  -0.256 -2.743 H47 KTY 85 
KTY H48 H48 H 0 1 N N N 13.956 15.516 71.748 -1.571  -5.263 2.306  H48 KTY 86 
KTY H49 H49 H 0 1 N N N 14.328 22.027 65.325 -13.979 5.165  -0.117 H49 KTY 87 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KTY C1  C2  SING N N 1  
KTY C3  C4  SING N N 2  
KTY C3  N1  SING N N 3  
KTY C4  C5  SING N N 4  
KTY C2  N1  SING N N 5  
KTY C2  O1  DOUB N N 6  
KTY N1  O8  SING N N 7  
KTY C6  C5  SING N N 8  
KTY C6  C7  SING N N 9  
KTY C7  N2  SING N N 10 
KTY C25 N6  SING N N 11 
KTY C25 C24 SING N N 12 
KTY C24 C23 SING N N 13 
KTY N2  C8  SING N N 14 
KTY C22 C23 SING N N 15 
KTY C22 C21 SING N N 16 
KTY C21 N5  SING N N 17 
KTY C8  C9  SING N N 18 
KTY C8  O2  DOUB N N 19 
KTY C9  C10 SING N N 20 
KTY C10 C11 SING N N 21 
KTY O3  C11 DOUB N N 22 
KTY N5  O6  SING N N 23 
KTY N5  C20 SING N N 24 
KTY C11 N3  SING N N 25 
KTY O5  C20 DOUB N N 26 
KTY C20 C19 SING N N 27 
KTY C16 N4  SING N N 28 
KTY C16 C15 SING N N 29 
KTY N4  C17 SING N N 30 
KTY C14 C15 SING N N 31 
KTY C14 C13 SING N N 32 
KTY N3  O7  SING N N 33 
KTY N3  C12 SING N N 34 
KTY C19 C18 SING N N 35 
KTY C12 C13 SING N N 36 
KTY C17 C18 SING N N 37 
KTY C17 O4  DOUB N N 38 
KTY C4  H1  SING N N 39 
KTY C4  H2  SING N N 40 
KTY C14 H3  SING N N 41 
KTY C14 H4  SING N N 42 
KTY C5  H5  SING N N 43 
KTY C5  H6  SING N N 44 
KTY C6  H7  SING N N 45 
KTY C6  H8  SING N N 46 
KTY C7  H9  SING N N 47 
KTY C7  H10 SING N N 48 
KTY C9  H11 SING N N 49 
KTY C9  H12 SING N N 50 
KTY C10 H13 SING N N 51 
KTY C10 H14 SING N N 52 
KTY C12 H15 SING N N 53 
KTY C12 H16 SING N N 54 
KTY C13 H17 SING N N 55 
KTY C13 H18 SING N N 56 
KTY N2  H19 SING N N 57 
KTY C3  H20 SING N N 58 
KTY C3  H21 SING N N 59 
KTY C1  H22 SING N N 60 
KTY C1  H23 SING N N 61 
KTY C1  H24 SING N N 62 
KTY C15 H25 SING N N 63 
KTY C15 H26 SING N N 64 
KTY C16 H27 SING N N 65 
KTY C16 H28 SING N N 66 
KTY N4  H29 SING N N 67 
KTY C18 H30 SING N N 68 
KTY C18 H31 SING N N 69 
KTY C19 H32 SING N N 70 
KTY C19 H33 SING N N 71 
KTY C21 H34 SING N N 72 
KTY C21 H35 SING N N 73 
KTY C22 H36 SING N N 74 
KTY C22 H37 SING N N 75 
KTY C23 H38 SING N N 76 
KTY C23 H39 SING N N 77 
KTY C24 H40 SING N N 78 
KTY C24 H41 SING N N 79 
KTY C25 H42 SING N N 80 
KTY C25 H43 SING N N 81 
KTY N6  H44 SING N N 82 
KTY N6  H45 SING N N 83 
KTY O6  H47 SING N N 84 
KTY O7  H48 SING N N 85 
KTY O8  H49 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KTY SMILES           ACDLabs              12.01 "C(CCCNC(CCC(N(CCCCCNC(CCC(=O)N(O)CCCCCN)=O)O)=O)=O)CN(O)C(C)=O"                                                                                                            
KTY InChI            InChI                1.03  "InChI=1S/C25H48N6O8/c1-21(32)29(37)18-9-3-6-16-27-22(33)12-14-25(36)31(39)20-10-4-7-17-28-23(34)11-13-24(35)30(38)19-8-2-5-15-26/h37-39H,2-20,26H2,1H3,(H,27,33)(H,28,34)" 
KTY InChIKey         InChI                1.03  UBQYURCVBFRUQT-UHFFFAOYSA-N                                                                                                                                                 
KTY SMILES_CANONICAL CACTVS               3.385 "CC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN"                                                                                                              
KTY SMILES           CACTVS               3.385 "CC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCNC(=O)CCC(=O)N(O)CCCCCN"                                                                                                              
KTY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCN)O)O)O"                                                                                                              
KTY SMILES           "OpenEye OEToolkits" 2.0.6 "CC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCNC(=O)CCC(=O)N(CCCCCN)O)O)O"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KTY "SYSTEMATIC NAME" ACDLabs              12.01 "N~4~-{5-[acetyl(hydroxy)amino]pentyl}-N~1~-[5-({4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoyl}amino)pentyl]-N~1~-hydroxybutanediamide"                   
KTY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}'-(5-azanylpentyl)-~{N}-[5-[[4-[5-[ethanoyl(oxidanyl)amino]pentylamino]-4-oxidanylidene-butanoyl]-oxidanyl-amino]pentyl]-~{N}'-oxidanyl-butanediamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KTY "Create component" 2019-01-14 RCSB 
KTY "Modify synonyms"  2020-06-05 PDBE 
KTY "Initial release"  2022-12-07 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      KTY 
_pdbx_chem_comp_synonyms.name         "N~4~-{5-[acetyl(hydroxy)amino]pentyl}-N~1~-[5-({4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoyl}amino)pentyl]-N~1~-hydroxybutanediamide" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
