data_18Z
# 
_chem_comp.id                                    18Z 
_chem_comp.name                                  "2-{[(2-aminopyrimidin-5-yl)methyl]amino}-5-nitro-4-{[2-(piperazin-1-yl)ethyl]amino}benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H25 N9 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-21 
_chem_comp.pdbx_modified_date                    2012-08-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        415.450 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     18Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RM6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
18Z N01  N01  N 0  1 N N N 94.443 45.945 -88.531 -3.054 4.507  -0.070 N01  18Z 1  
18Z N02  N02  N 0  1 N N N 95.058 44.507 -82.391 2.494  1.296  0.069  N02  18Z 2  
18Z N03  N03  N 0  1 N N N 91.822 46.360 -85.384 -2.232 0.400  -0.034 N03  18Z 3  
18Z N04  N04  N 0  1 Y N N 90.265 47.355 -81.016 -4.924 -2.930 -1.089 N04  18Z 4  
18Z N05  N05  N 0  1 Y N N 90.365 49.244 -82.529 -5.141 -2.676 1.200  N05  18Z 5  
18Z N06  N06  N 0  1 N N N 90.179 49.484 -80.296 -6.790 -3.820 0.002  N06  18Z 6  
18Z N07  N07  N 0  1 N N N 94.867 41.408 -80.485 4.547  -1.805 0.403  N07  18Z 7  
18Z N08  N08  N 0  1 N N N 95.229 38.689 -79.618 5.392  -4.380 -0.469 N08  18Z 8  
18Z N09  N09  N 1  1 N N N 96.925 44.518 -84.418 2.054  4.083  -0.033 N09  18Z 9  
18Z C10  C10  C 0  1 Y N N 95.349 45.446 -85.909 -0.357 3.586  -0.084 C10  18Z 10 
18Z C11  C11  C 0  1 Y N N 94.024 45.932 -86.183 -1.428 2.685  -0.085 C11  18Z 11 
18Z C12  C12  C 0  1 Y N N 93.036 45.918 -85.137 -1.176 1.303  -0.034 C12  18Z 12 
18Z C13  C13  C 0  1 Y N N 93.419 45.418 -83.833 0.131  0.846  0.017  C13  18Z 13 
18Z C14  C14  C 0  1 Y N N 94.741 44.940 -83.569 1.182  1.754  0.018  C14  18Z 14 
18Z C15  C15  C 0  1 Y N N 95.720 44.948 -84.619 0.926  3.124  -0.034 C15  18Z 15 
18Z C16  C16  C 0  1 N N N 93.736 46.403 -87.452 -2.811 3.183  -0.139 C16  18Z 16 
18Z C17  C17  C 0  1 N N N 90.598 46.025 -84.588 -1.973 -1.030 0.149  C17  18Z 17 
18Z C18  C18  C 0  1 Y N N 90.471 46.973 -83.421 -3.276 -1.786 0.109  C18  18Z 18 
18Z C19  C19  C 0  1 Y N N 90.368 46.522 -82.100 -3.777 -2.271 -1.089 C19  18Z 19 
18Z C20  C20  C 0  1 Y N N 90.271 48.691 -81.285 -5.592 -3.127 0.038  C20  18Z 20 
18Z C21  C21  C 0  1 Y N N 90.465 48.362 -83.572 -4.001 -2.009 1.270  C21  18Z 21 
18Z C22  C22  C 0  1 N N N 94.284 43.447 -81.699 2.764  -0.136 0.222  C22  18Z 22 
18Z C23  C23  C 0  1 N N N 95.159 42.817 -80.606 4.276  -0.369 0.249  C23  18Z 23 
18Z C24  C24  C 0  1 N N N 94.017 40.814 -79.447 5.972  -2.097 0.197  C24  18Z 24 
18Z C25  C25  C 0  1 N N N 94.776 39.707 -78.683 6.226  -3.586 0.443  C25  18Z 25 
18Z C26  C26  C 0  1 N N N 96.126 39.293 -80.589 3.966  -4.088 -0.263 C26  18Z 26 
18Z C27  C27  C 0  1 N N N 95.362 40.361 -81.385 3.712  -2.599 -0.510 C27  18Z 27 
18Z O28  O28  O 0  1 N N N 92.859 47.240 -87.631 -3.736 2.400  -0.245 O28  18Z 28 
18Z O29  O29  O -1 1 N N N 97.927 44.953 -85.152 1.961  5.131  0.580  O29  18Z 29 
18Z O30  O30  O 0  1 N N N 97.179 43.616 -83.492 3.075  3.823  -0.645 O30  18Z 30 
18Z HN01 HN01 H 0  0 N N N 94.240 46.293 -89.446 -2.317 5.132  0.015  HN01 18Z 31 
18Z HN0A HN0A H 0  0 N N N 95.162 45.262 -88.404 -3.966 4.835  -0.110 HN0A 18Z 32 
18Z HN02 HN02 H 0  0 N N N 95.984 44.142 -82.483 3.230  1.924  0.003  HN02 18Z 33 
18Z HN03 HN03 H 0  0 N N N 91.900 47.355 -85.316 -3.141 0.717  -0.155 HN03 18Z 34 
18Z HN06 HN06 H 0  0 N N N 90.115 48.956 -79.449 -7.130 -4.156 -0.842 HN06 18Z 35 
18Z HN0B HN0B H 0  0 N N N 90.988 50.070 -80.263 -7.288 -3.971 0.820  HN0B 18Z 36 
18Z HN08 HN08 H 0  0 N N N 95.712 37.969 -79.120 5.658  -4.224 -1.430 HN08 18Z 37 
18Z H10  H10  H 0  1 N N N 96.086 45.457 -86.699 -0.546 4.648  -0.127 H10  18Z 38 
18Z H13  H13  H 0  1 N N N 92.687 45.406 -83.039 0.333  -0.214 0.057  H13  18Z 39 
18Z H17  H17  H 0  1 N N N 89.709 46.116 -85.230 -1.322 -1.386 -0.649 H17  18Z 40 
18Z H17A H17A H 0  0 N N N 90.678 44.994 -84.213 -1.489 -1.191 1.112  H17A 18Z 41 
18Z H19  H19  H 0  1 N N N 90.370 45.456 -81.925 -3.237 -2.114 -2.010 H19  18Z 42 
18Z H21  H21  H 0  1 N N N 90.544 48.764 -84.571 -3.639 -1.644 2.219  H21  18Z 43 
18Z H22  H22  H 0  1 N N N 93.384 43.886 -81.243 2.325  -0.491 1.154  H22  18Z 44 
18Z H22A H22A H 0  0 N N N 93.987 42.675 -82.424 2.328  -0.680 -0.616 H22A 18Z 45 
18Z H23  H23  H 0  1 N N N 94.953 43.313 -79.646 4.712  0.175  1.087  H23  18Z 46 
18Z H23A H23A H 0  0 N N N 96.219 42.946 -80.871 4.715  -0.014 -0.683 H23A 18Z 47 
18Z H24  H24  H 0  1 N N N 93.717 41.599 -78.737 6.251  -1.845 -0.826 H24  18Z 48 
18Z H24A H24A H 0  0 N N N 93.126 40.376 -79.920 6.569  -1.506 0.892  H24A 18Z 49 
18Z H25  H25  H 0  1 N N N 94.105 39.249 -77.941 5.973  -3.832 1.474  H25  18Z 50 
18Z H25A H25A H 0  0 N N N 95.645 40.146 -78.172 7.278  -3.810 0.263  H25A 18Z 51 
18Z H26  H26  H 0  1 N N N 96.974 39.759 -80.067 3.370  -4.679 -0.959 H26  18Z 52 
18Z H26A H26A H 0  0 N N N 96.501 38.520 -81.276 3.688  -4.340 0.760  H26A 18Z 53 
18Z H27  H27  H 0  1 N N N 94.509 39.890 -81.896 2.661  -2.375 -0.329 H27  18Z 54 
18Z H27A H27A H 0  0 N N N 96.037 40.811 -82.127 3.965  -2.353 -1.541 H27A 18Z 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
18Z N01 C16  SING N N 1  
18Z N01 HN01 SING N N 2  
18Z N01 HN0A SING N N 3  
18Z N02 C14  SING N N 4  
18Z N02 C22  SING N N 5  
18Z N02 HN02 SING N N 6  
18Z N03 C12  SING N N 7  
18Z N03 C17  SING N N 8  
18Z N03 HN03 SING N N 9  
18Z N04 C19  DOUB Y N 10 
18Z N04 C20  SING Y N 11 
18Z N05 C20  DOUB Y N 12 
18Z N05 C21  SING Y N 13 
18Z N06 C20  SING N N 14 
18Z N06 HN06 SING N N 15 
18Z N06 HN0B SING N N 16 
18Z N07 C23  SING N N 17 
18Z N07 C24  SING N N 18 
18Z N07 C27  SING N N 19 
18Z N08 C25  SING N N 20 
18Z N08 C26  SING N N 21 
18Z N08 HN08 SING N N 22 
18Z N09 C15  SING N N 23 
18Z N09 O29  SING N N 24 
18Z N09 O30  DOUB N N 25 
18Z C10 C11  DOUB Y N 26 
18Z C10 C15  SING Y N 27 
18Z C10 H10  SING N N 28 
18Z C11 C12  SING Y N 29 
18Z C11 C16  SING N N 30 
18Z C12 C13  DOUB Y N 31 
18Z C13 C14  SING Y N 32 
18Z C13 H13  SING N N 33 
18Z C14 C15  DOUB Y N 34 
18Z C16 O28  DOUB N N 35 
18Z C17 C18  SING N N 36 
18Z C17 H17  SING N N 37 
18Z C17 H17A SING N N 38 
18Z C18 C19  SING Y N 39 
18Z C18 C21  DOUB Y N 40 
18Z C19 H19  SING N N 41 
18Z C21 H21  SING N N 42 
18Z C22 C23  SING N N 43 
18Z C22 H22  SING N N 44 
18Z C22 H22A SING N N 45 
18Z C23 H23  SING N N 46 
18Z C23 H23A SING N N 47 
18Z C24 C25  SING N N 48 
18Z C24 H24  SING N N 49 
18Z C24 H24A SING N N 50 
18Z C25 H25  SING N N 51 
18Z C25 H25A SING N N 52 
18Z C26 C27  SING N N 53 
18Z C26 H26  SING N N 54 
18Z C26 H26A SING N N 55 
18Z C27 H27  SING N N 56 
18Z C27 H27A SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
18Z SMILES           ACDLabs              12.01 "[O-][N+](=O)c3cc(C(=O)N)c(NCc1cnc(nc1)N)cc3NCCN2CCNCC2"                                                                                                           
18Z SMILES_CANONICAL CACTVS               3.370 "NC(=O)c1cc(c(NCCN2CCNCC2)cc1NCc3cnc(N)nc3)[N+]([O-])=O"                                                                                                           
18Z SMILES           CACTVS               3.370 "NC(=O)c1cc(c(NCCN2CCNCC2)cc1NCc3cnc(N)nc3)[N+]([O-])=O"                                                                                                           
18Z SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1c(c(cc(c1[N+](=O)[O-])NCCN2CCNCC2)NCc3cnc(nc3)N)C(=O)N"                                                                                                         
18Z SMILES           "OpenEye OEToolkits" 1.7.2 "c1c(c(cc(c1[N+](=O)[O-])NCCN2CCNCC2)NCc3cnc(nc3)N)C(=O)N"                                                                                                         
18Z InChI            InChI                1.03  "InChI=1S/C18H25N9O3/c19-17(28)13-7-16(27(29)30)15(22-3-6-26-4-1-21-2-5-26)8-14(13)23-9-12-10-24-18(20)25-11-12/h7-8,10-11,21-23H,1-6,9H2,(H2,19,28)(H2,20,24,25)" 
18Z InChIKey         InChI                1.03  IDZSPROLKKFEMF-UHFFFAOYSA-N                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
18Z "SYSTEMATIC NAME" ACDLabs              12.01 "2-{[(2-aminopyrimidin-5-yl)methyl]amino}-5-nitro-4-{[2-(piperazin-1-yl)ethyl]amino}benzamide" 
18Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "2-[(2-azanylpyrimidin-5-yl)methylamino]-5-nitro-4-(2-piperazin-1-ylethylamino)benzamide"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
18Z "Create component"  2011-04-21 RCSB 
18Z "Modify descriptor" 2011-06-04 RCSB 
# 
