data_M3Z
#

_chem_comp.id                                   M3Z
_chem_comp.name                                 "6-[[methyl-(phenylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H15 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-03
_chem_comp.pdbx_modified_date                   2020-02-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       245.277
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M3Z
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6SZR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M3Z  CAC  C1   C  0  1  N  N  N   0.265  -4.168  5.618   0.675  -0.090   1.460  CAC  M3Z   1  
M3Z  CAF  C2   C  0  1  Y  N  N  -1.345   1.175  4.687   4.852   0.554   0.945  CAF  M3Z   2  
M3Z  CAG  C3   C  0  1  Y  N  N  -1.145  -0.172  5.007   3.759  -0.290   1.018  CAG  M3Z   3  
M3Z  CAH  C4   C  0  1  Y  N  N  -0.836   2.177  5.531   5.255   1.058  -0.277  CAH  M3Z   4  
M3Z  CAI  C5   C  0  1  Y  N  N   0.091   0.466  7.025   3.473  -0.124  -1.354  CAI  M3Z   5  
M3Z  CAJ  C6   C  0  1  N  N  N   1.232  -1.094  2.924  -3.151  -1.296  -0.186  CAJ  M3Z   6  
M3Z  CAK  C7   C  0  1  N  N  N  -0.200  -2.003  6.515   1.879  -1.549  -0.052  CAK  M3Z   7  
M3Z  CAL  C8   C  0  1  N  N  N   1.693  -2.400  5.075  -0.542  -1.586  -0.004  CAL  M3Z   8  
M3Z  CAQ  C9   C  0  1  Y  N  N  -0.425  -0.534  6.184   3.070  -0.629  -0.131  CAQ  M3Z   9  
M3Z  CAR  C10  C  0  1  N  N  N   1.751  -1.100  4.188  -1.763  -0.704  -0.035  CAR  M3Z  10  
M3Z  CAS  C11  C  0  1  Y  N  N  -0.113   1.825  6.707   4.566   0.719  -1.426  CAS  M3Z  11  
M3Z  CAT  C12  C  0  1  N  N  N   1.313   0.087  2.162  -4.303  -0.307  -0.204  CAT  M3Z  12  
M3Z  CAU  C13  C  0  1  N  N  N   2.307   1.144  3.946  -2.716   1.402   0.043  CAU  M3Z  13  
M3Z  NAO  N1   N  0  1  N  N  N   2.268   0.047  4.677  -1.659   0.584   0.067  NAO  M3Z  14  
M3Z  NAP  N2   N  0  1  N  N  N   1.845   1.172  2.695  -3.988   1.002  -0.085  NAP  M3Z  15  
M3Z  NAX  N3   N  0  1  N  N  N   0.294  -2.734  5.333   0.659  -0.755   0.150  NAX  M3Z  16  
M3Z  OAD  O1   O  0  1  N  N  N   0.825   0.096  0.837  -5.452  -0.675  -0.321  OAD  M3Z  17  
M3Z  OAE  O2   O  0  1  N  N  N   2.850   2.282  4.476  -2.508   2.595   0.146  OAE  M3Z  18  
M3Z  H1   H1   H  0  1  N  N  N  -0.770  -4.481  5.822   0.667  -0.842   2.249  H1   M3Z  19  
M3Z  H2   H2   H  0  1  N  N  N   0.651  -4.722  4.750   1.575   0.519   1.548  H2   M3Z  20  
M3Z  H3   H3   H  0  1  N  N  N   0.892  -4.380  6.497  -0.205   0.546   1.555  H3   M3Z  21  
M3Z  H4   H4   H  0  1  N  N  N  -1.889   1.444  3.794   5.387   0.822   1.844  H4   M3Z  22  
M3Z  H5   H5   H  0  1  N  N  N  -1.538  -0.942  4.359   3.444  -0.684   1.973  H5   M3Z  23  
M3Z  H6   H6   H  0  1  N  N  N  -0.994   3.217  5.287   6.109   1.718  -0.333  H6   M3Z  24  
M3Z  H7   H7   H  0  1  N  N  N   0.643   0.195  7.913   2.935  -0.390  -2.252  H7   M3Z  25  
M3Z  H8   H8   H  0  1  N  N  N   0.166  -1.350  3.011  -3.178  -1.865  -1.115  H8   M3Z  26  
M3Z  H9   H9   H  0  1  N  N  N   1.752  -1.880  2.357  -3.316  -1.989   0.639  H9   M3Z  27  
M3Z  H10  H10  H  0  1  N  N  N  -1.150  -2.449  6.844   1.794  -2.114  -0.980  H10  M3Z  28  
M3Z  H11  H11  H  0  1  N  N  N   0.541  -2.081  7.324   2.006  -2.237   0.783  H11  M3Z  29  
M3Z  H12  H12  H  0  1  N  N  N   2.179  -3.232  4.544  -0.615  -2.278   0.835  H12  M3Z  30  
M3Z  H13  H13  H  0  1  N  N  N   2.212  -2.220  6.028  -0.477  -2.149  -0.935  H13  M3Z  31  
M3Z  H14  H14  H  0  1  N  N  N   0.278   2.597  7.353   4.881   1.114  -2.381  H14  M3Z  32  
M3Z  H15  H15  H  0  1  N  N  N   1.901   2.015  2.160  -4.696   1.665  -0.092  H15  M3Z  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M3Z  OAD  CAT  DOUB  N  N   1  
M3Z  CAT  NAP  SING  N  N   2  
M3Z  CAT  CAJ  SING  N  N   3  
M3Z  NAP  CAU  SING  N  N   4  
M3Z  CAJ  CAR  SING  N  N   5  
M3Z  CAU  OAE  DOUB  N  N   6  
M3Z  CAU  NAO  SING  N  N   7  
M3Z  CAR  NAO  DOUB  N  N   8  
M3Z  CAR  CAL  SING  N  N   9  
M3Z  CAF  CAG  DOUB  Y  N  10  
M3Z  CAF  CAH  SING  Y  N  11  
M3Z  CAG  CAQ  SING  Y  N  12  
M3Z  CAL  NAX  SING  N  N  13  
M3Z  NAX  CAC  SING  N  N  14  
M3Z  NAX  CAK  SING  N  N  15  
M3Z  CAH  CAS  DOUB  Y  N  16  
M3Z  CAQ  CAK  SING  N  N  17  
M3Z  CAQ  CAI  DOUB  Y  N  18  
M3Z  CAS  CAI  SING  Y  N  19  
M3Z  CAC  H1   SING  N  N  20  
M3Z  CAC  H2   SING  N  N  21  
M3Z  CAC  H3   SING  N  N  22  
M3Z  CAF  H4   SING  N  N  23  
M3Z  CAG  H5   SING  N  N  24  
M3Z  CAH  H6   SING  N  N  25  
M3Z  CAI  H7   SING  N  N  26  
M3Z  CAJ  H8   SING  N  N  27  
M3Z  CAJ  H9   SING  N  N  28  
M3Z  CAK  H10  SING  N  N  29  
M3Z  CAK  H11  SING  N  N  30  
M3Z  CAL  H12  SING  N  N  31  
M3Z  CAL  H13  SING  N  N  32  
M3Z  CAS  H14  SING  N  N  33  
M3Z  NAP  H15  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M3Z  InChI             InChI                 1.03   "InChI=1S/C13H15N3O2/c1-16(8-10-5-3-2-4-6-10)9-11-7-12(17)15-13(18)14-11/h2-6H,7-9H2,1H3,(H,15,17,18)"  
M3Z  InChIKey          InChI                 1.03   RNBXCVLIBKJIGQ-UHFFFAOYSA-N  
M3Z  SMILES_CANONICAL  CACTVS                3.385  "CN(CC1=NC(=O)NC(=O)C1)Cc2ccccc2"  
M3Z  SMILES            CACTVS                3.385  "CN(CC1=NC(=O)NC(=O)C1)Cc2ccccc2"  
M3Z  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN(Cc1ccccc1)CC2=NC(=O)NC(=O)C2"  
M3Z  SMILES            "OpenEye OEToolkits"  2.0.7  "CN(Cc1ccccc1)CC2=NC(=O)NC(=O)C2"  
#
_pdbx_chem_comp_identifier.comp_id          M3Z
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "6-[[methyl-(phenylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M3Z  "Create component"  2019-10-03  PDBE  
M3Z  "Initial release"   2020-03-04  RCSB  
##
