data_M7Z
#

_chem_comp.id                                   M7Z
_chem_comp.name                                 "4-chloranyl-~{N}-[2-(piperidin-1-ylmethyl)-3~{H}-benzimidazol-5-yl]benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H21 Cl N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-04
_chem_comp.pdbx_modified_date                   2019-11-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       368.860
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M7Z
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6T1N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M7Z  C1   C1   C   0  1  Y  N  N   4.034  15.815  13.792   5.850  -1.758  -0.066  C1   M7Z   1  
M7Z  C2   C2   C   0  1  Y  N  N   2.790  15.819  14.406   4.490  -1.547   0.023  C2   M7Z   2  
M7Z  N2   N1   N   0  1  N  N  N  -6.626  12.975  19.390  -5.754  -0.230  -0.239  N2   M7Z   3  
M7Z  C3   C3   C   0  1  Y  N  N   1.780  14.952  13.985   3.993  -0.245   0.109  C3   M7Z   4  
M7Z  C4   C4   C   0  1  Y  N  N   2.051  14.066  12.944   4.876   0.836   0.103  C4   M7Z   5  
M7Z  C5   C5   C   0  1  Y  N  N   3.290  14.058  12.323   6.234   0.612   0.013  C5   M7Z   6  
M7Z  C6   C6   C   0  1  N  N  N   0.403  15.026  14.575   2.537  -0.012   0.204  C6   M7Z   7  
M7Z  C7   C7   C   0  1  Y  N  N  -0.788  15.248  16.774   0.679   1.473   0.266  C7   M7Z   8  
M7Z  C8   C8   C   0  1  Y  N  N  -0.595  15.666  18.103   0.138   2.528   0.999  C8   M7Z   9  
M7Z  C9   C9   C   0  1  Y  N  N  -1.630  15.587  19.026  -1.206   2.766   0.985  C9   M7Z  10  
M7Z  C10  C10  C   0  1  Y  N  N  -2.860  15.101  18.606  -2.053   1.949   0.231  C10  M7Z  11  
M7Z  C11  C11  C   0  1  Y  N  N  -4.951  14.449  18.353  -3.702   0.956  -0.778  C11  M7Z  12  
M7Z  C12  C12  C   0  1  N  N  N  -6.396  14.238  18.677  -5.098   0.623  -1.239  C12  M7Z  13  
M7Z  C13  C13  C   0  1  N  N  N  -6.269  13.101  20.817  -7.185  -0.381  -0.532  C13  M7Z  14  
M7Z  C14  C14  C   0  1  N  N  N  -6.473  11.790  21.576  -7.862  -1.151   0.604  C14  M7Z  15  
M7Z  C15  C15  C   0  1  N  N  N  -7.897  11.289  21.431  -7.203  -2.526   0.745  C15  M7Z  16  
M7Z  C16  C16  C   0  1  N  N  N  -8.302  11.243  19.968  -5.705  -2.342   1.002  C16  M7Z  17  
M7Z  C17  C17  C   0  1  N  N  N  -8.040  12.575  19.287  -5.090  -1.537  -0.145  C17  M7Z  18  
M7Z  C18  C18  C   0  1  Y  N  N  -3.079  14.691  17.297  -1.511   0.885  -0.510  C18  M7Z  19  
M7Z  C19  C19  C   0  1  Y  N  N  -2.038  14.763  16.363  -0.144   0.652  -0.488  C19  M7Z  20  
M7Z  O    O1   O   0  1  N  N  N  -0.592  14.911  13.863   1.769  -0.955   0.209  O    M7Z  21  
M7Z  C    C20  C   0  1  Y  N  N   4.268  14.942  12.754   6.722  -0.682  -0.066  C    M7Z  22  
M7Z  CL   CL1  CL  0  0  N  N  N   5.833  14.947  11.961   8.432  -0.956  -0.179  CL   M7Z  23  
M7Z  N    N2   N   0  1  N  N  N   0.348  15.274  15.915   2.059   1.245   0.287  N    M7Z  24  
M7Z  N3   N3   N   0  1  Y  N  N  -4.412  14.274  17.158  -2.579   0.275  -1.137  N3   M7Z  25  
M7Z  N1   N4   N   0  1  Y  N  N  -4.072  14.936  19.259  -3.395   1.934   0.022  N1   M7Z  26  
M7Z  H1   H1   H   0  1  N  N  N   4.810  16.489  14.125   6.235  -2.765  -0.132  H1   M7Z  27  
M7Z  H2   H2   H   0  1  N  N  N   2.600  16.502  15.221   3.811  -2.387   0.027  H2   M7Z  28  
M7Z  H4   H4   H   0  1  N  N  N   1.286  13.377  12.617   4.497   1.845   0.168  H4   M7Z  29  
M7Z  H5   H5   H   0  1  N  N  N   3.491  13.372  11.514   6.919   1.447   0.012  H5   M7Z  30  
M7Z  H6   H6   H   0  1  N  N  N   0.366  16.052  18.409   0.788   3.162   1.583  H6   M7Z  31  
M7Z  H7   H7   H   0  1  N  N  N  -1.480  15.897  20.050  -1.615   3.586   1.558  H7   M7Z  32  
M7Z  H8   H8   H   0  1  N  N  N  -6.743  15.069  19.308  -5.050   0.095  -2.191  H8   M7Z  33  
M7Z  H9   H9   H   0  1  N  N  N  -6.971  14.225  17.739  -5.669   1.543  -1.362  H9   M7Z  34  
M7Z  H10  H10  H   0  1  N  N  N  -5.212  13.395  20.894  -7.642   0.604  -0.626  H10  M7Z  35  
M7Z  H11  H11  H   0  1  N  N  N  -6.900  13.878  21.274  -7.308  -0.929  -1.467  H11  M7Z  36  
M7Z  H12  H12  H   0  1  N  N  N  -5.783  11.032  21.175  -7.751  -0.597   1.536  H12  M7Z  37  
M7Z  H13  H13  H   0  1  N  N  N  -6.257  11.955  22.642  -8.921  -1.276   0.378  H13  M7Z  38  
M7Z  H14  H14  H   0  1  N  N  N  -8.575  11.965  21.973  -7.653  -3.062   1.581  H14  M7Z  39  
M7Z  H15  H15  H   0  1  N  N  N  -7.970  10.278  21.858  -7.348  -3.096  -0.173  H15  M7Z  40  
M7Z  H16  H16  H   0  1  N  N  N  -9.375  11.009  19.899  -5.560  -1.806   1.940  H16  M7Z  41  
M7Z  H17  H17  H   0  1  N  N  N  -7.722  10.459  19.459  -5.223  -3.318   1.062  H17  M7Z  42  
M7Z  H18  H18  H   0  1  N  N  N  -8.663  13.346  19.763  -5.223  -2.079  -1.082  H18  M7Z  43  
M7Z  H19  H19  H   0  1  N  N  N  -8.309  12.490  18.224  -4.026  -1.392   0.042  H19  M7Z  44  
M7Z  H20  H20  H   0  1  N  N  N  -2.195  14.450  15.342   0.277  -0.165  -1.055  H20  M7Z  45  
M7Z  H21  H21  H   0  1  N  N  N   1.218  15.504  16.351   2.673   1.993   0.360  H21  M7Z  46  
M7Z  H22  H22  H   0  1  N  N  N  -4.857  13.921  16.335  -2.537  -0.496  -1.725  H22  M7Z  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M7Z  CL   C    SING  N  N   1  
M7Z  C5   C    DOUB  Y  N   2  
M7Z  C5   C4   SING  Y  N   3  
M7Z  C    C1   SING  Y  N   4  
M7Z  C4   C3   DOUB  Y  N   5  
M7Z  C1   C2   DOUB  Y  N   6  
M7Z  O    C6   DOUB  N  N   7  
M7Z  C3   C2   SING  Y  N   8  
M7Z  C3   C6   SING  N  N   9  
M7Z  C6   N    SING  N  N  10  
M7Z  N    C7   SING  N  N  11  
M7Z  C19  C7   DOUB  Y  N  12  
M7Z  C19  C18  SING  Y  N  13  
M7Z  C7   C8   SING  Y  N  14  
M7Z  N3   C18  SING  Y  N  15  
M7Z  N3   C11  SING  Y  N  16  
M7Z  C18  C10  DOUB  Y  N  17  
M7Z  C8   C9   DOUB  Y  N  18  
M7Z  C11  C12  SING  N  N  19  
M7Z  C11  N1   DOUB  Y  N  20  
M7Z  C10  C9   SING  Y  N  21  
M7Z  C10  N1   SING  Y  N  22  
M7Z  C12  N2   SING  N  N  23  
M7Z  C17  N2   SING  N  N  24  
M7Z  C17  C16  SING  N  N  25  
M7Z  N2   C13  SING  N  N  26  
M7Z  C16  C15  SING  N  N  27  
M7Z  C13  C14  SING  N  N  28  
M7Z  C15  C14  SING  N  N  29  
M7Z  C1   H1   SING  N  N  30  
M7Z  C2   H2   SING  N  N  31  
M7Z  C4   H4   SING  N  N  32  
M7Z  C5   H5   SING  N  N  33  
M7Z  C8   H6   SING  N  N  34  
M7Z  C9   H7   SING  N  N  35  
M7Z  C12  H8   SING  N  N  36  
M7Z  C12  H9   SING  N  N  37  
M7Z  C13  H10  SING  N  N  38  
M7Z  C13  H11  SING  N  N  39  
M7Z  C14  H12  SING  N  N  40  
M7Z  C14  H13  SING  N  N  41  
M7Z  C15  H14  SING  N  N  42  
M7Z  C15  H15  SING  N  N  43  
M7Z  C16  H16  SING  N  N  44  
M7Z  C16  H17  SING  N  N  45  
M7Z  C17  H18  SING  N  N  46  
M7Z  C17  H19  SING  N  N  47  
M7Z  C19  H20  SING  N  N  48  
M7Z  N    H21  SING  N  N  49  
M7Z  N3   H22  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M7Z  InChI             InChI                 1.03   "InChI=1S/C20H21ClN4O/c21-15-6-4-14(5-7-15)20(26)22-16-8-9-17-18(12-16)24-19(23-17)13-25-10-2-1-3-11-25/h4-9,12H,1-3,10-11,13H2,(H,22,26)(H,23,24)"  
M7Z  InChIKey          InChI                 1.03   BKSMGCKPKGVUHS-UHFFFAOYSA-N  
M7Z  SMILES_CANONICAL  CACTVS                3.385  "Clc1ccc(cc1)C(=O)Nc2ccc3nc(CN4CCCCC4)[nH]c3c2"  
M7Z  SMILES            CACTVS                3.385  "Clc1ccc(cc1)C(=O)Nc2ccc3nc(CN4CCCCC4)[nH]c3c2"  
M7Z  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C(=O)Nc2ccc3c(c2)[nH]c(n3)CN4CCCCC4)Cl"  
M7Z  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C(=O)Nc2ccc3c(c2)[nH]c(n3)CN4CCCCC4)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          M7Z
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-chloranyl-~{N}-[2-(piperidin-1-ylmethyl)-3~{H}-benzimidazol-5-yl]benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M7Z  "Create component"  2019-10-04  PDBE  
M7Z  "Initial release"   2019-11-06  RCSB  
##
