data_R3Z
# 
_chem_comp.id                                    R3Z 
_chem_comp.name                                  "1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H12 N2 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-02-04 
_chem_comp.pdbx_modified_date                    2016-08-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        332.331 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R3Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FV7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R3Z C1   C1   C 0 1 Y N N -13.869 -8.134 -1.110 5.233  -1.057 -1.293 C1   R3Z 1  
R3Z C2   C2   C 0 1 Y N N -14.944 -8.084 -1.991 4.169  -1.924 -1.456 C2   R3Z 2  
R3Z C3   C3   C 0 1 Y N N -15.844 -7.025 -1.942 2.928  -1.606 -0.938 C3   R3Z 3  
R3Z C4   C4   C 0 1 Y N N -15.680 -6.003 -1.005 2.747  -0.414 -0.253 C4   R3Z 4  
R3Z C5   C5   C 0 1 Y N N -14.597 -6.062 -0.118 3.815  0.460  -0.090 C5   R3Z 5  
R3Z C6   C6   C 0 1 Y N N -13.695 -7.125 -0.171 5.058  0.133  -0.611 C6   R3Z 6  
R3Z O7   O7   O 0 1 N N N -14.417 -5.076 0.802  3.657  1.638  0.573  O7   R3Z 7  
R3Z C8   C8   C 0 1 N N N -15.568 -4.282 1.129  2.498  1.757  1.404  C8   R3Z 8  
R3Z C9   C9   C 0 1 N N S -16.280 -3.809 -0.156 1.285  1.250  0.613  C9   R3Z 9  
R3Z O10  O10  O 0 1 N N N -16.582 -4.964 -0.963 1.520  -0.117 0.258  O10  R3Z 10 
R3Z C11  C11  C 0 1 N N N -17.549 -2.980 0.153  0.026  1.349  1.477  C11  R3Z 11 
R3Z N12  N12  N 0 1 N N N -18.362 -3.489 1.286  -1.128 0.864  0.717  N12  R3Z 12 
R3Z C13  C13  C 0 1 Y N N -19.292 -4.521 1.051  -1.477 -0.492 0.774  C13  R3Z 13 
R3Z C14  C14  C 0 1 Y N N -19.601 -5.185 -0.132 -0.882 -1.536 1.473  C14  R3Z 14 
R3Z C15  C15  C 0 1 Y N N -20.536 -6.123 -0.031 -1.454 -2.728 1.322  C15  R3Z 15 
R3Z S16  S16  S 0 1 Y N N -21.118 -6.262 1.566  -2.800 -2.641 0.281  S16  R3Z 16 
R3Z C17  C17  C 0 1 Y N N -20.048 -4.986 2.122  -2.574 -0.914 0.043  C17  R3Z 17 
R3Z C18  C18  C 0 1 N N N -19.870 -4.415 3.414  -3.297 0.030  -0.729 C18  R3Z 18 
R3Z O19  O19  O 0 1 N N N -20.527 -4.816 4.364  -4.265 -0.324 -1.378 O19  R3Z 19 
R3Z N20  N20  N 0 1 N N N -18.971 -3.424 3.584  -2.909 1.319  -0.740 N20  R3Z 20 
R3Z C21  C21  C 0 1 N N N -18.238 -2.974 2.538  -1.846 1.722  -0.024 C21  R3Z 21 
R3Z O22  O22  O 0 1 N N N -17.438 -2.078 2.744  -1.523 2.895  -0.052 O22  R3Z 22 
R3Z O23  O23  O 0 1 N N N -18.803 -2.860 4.876  -3.631 2.261  -1.512 O23  R3Z 23 
R3Z H1   H1   H 0 1 N N N -13.170 -8.956 -1.156 6.203  -1.311 -1.694 H1   R3Z 24 
R3Z H2   H2   H 0 1 N N N -15.081 -8.872 -2.717 4.309  -2.853 -1.990 H2   R3Z 25 
R3Z H3   H3   H 0 1 N N N -16.674 -6.993 -2.632 2.099  -2.285 -1.068 H3   R3Z 26 
R3Z H6   H6   H 0 1 N N N -12.863 -7.163 0.517  5.891  0.810  -0.485 H6   R3Z 27 
R3Z H8   H8   H 0 1 N N N -16.266 -4.885 1.728  2.627  1.156  2.304  H8   R3Z 28 
R3Z H8A  H8A  H 0 1 N N N -15.249 -3.404 1.710  2.348  2.802  1.678  H8A  R3Z 29 
R3Z H9   H9   H 0 1 N N N -15.583 -3.160 -0.706 1.159  1.848  -0.290 H9   R3Z 30 
R3Z H11  H11  H 0 1 N N N -17.237 -1.952 0.390  0.153  0.742  2.374  H11  R3Z 31 
R3Z H11A H11A H 0 0 N N N -18.182 -2.974 -0.747 -0.137 2.388  1.763  H11A R3Z 32 
R3Z H14  H14  H 0 1 N N N -19.114 -4.954 -1.068 -0.013 -1.389 2.096  H14  R3Z 33 
R3Z H15  H15  H 0 1 N N N -20.885 -6.724 -0.858 -1.109 -3.634 1.798  H15  R3Z 34 
R3Z HO23 HO23 H 0 0 N N N -18.141 -2.180 4.841  -4.382 1.884  -1.991 HO23 R3Z 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R3Z C1  C2   DOUB Y N 1  
R3Z C1  C6   SING Y N 2  
R3Z C2  C3   SING Y N 3  
R3Z C3  C4   DOUB Y N 4  
R3Z C4  C5   SING Y N 5  
R3Z C4  O10  SING N N 6  
R3Z C5  C6   DOUB Y N 7  
R3Z C5  O7   SING N N 8  
R3Z O7  C8   SING N N 9  
R3Z C8  C9   SING N N 10 
R3Z C9  O10  SING N N 11 
R3Z C9  C11  SING N N 12 
R3Z C11 N12  SING N N 13 
R3Z N12 C13  SING N N 14 
R3Z N12 C21  SING N N 15 
R3Z C13 C14  SING Y N 16 
R3Z C13 C17  DOUB Y N 17 
R3Z C14 C15  DOUB Y N 18 
R3Z C15 S16  SING Y N 19 
R3Z S16 C17  SING Y N 20 
R3Z C17 C18  SING N N 21 
R3Z C18 O19  DOUB N N 22 
R3Z C18 N20  SING N N 23 
R3Z N20 C21  SING N N 24 
R3Z N20 O23  SING N N 25 
R3Z C21 O22  DOUB N N 26 
R3Z C1  H1   SING N N 27 
R3Z C2  H2   SING N N 28 
R3Z C3  H3   SING N N 29 
R3Z C6  H6   SING N N 30 
R3Z C8  H8   SING N N 31 
R3Z C8  H8A  SING N N 32 
R3Z C9  H9   SING N N 33 
R3Z C11 H11  SING N N 34 
R3Z C11 H11A SING N N 35 
R3Z C14 H14  SING N N 36 
R3Z C15 H15  SING N N 37 
R3Z O23 HO23 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R3Z SMILES           ACDLabs              12.01 "c1ccc2c(c1)OCC(O2)CN4c3ccsc3C(=O)N(C4=O)O"                                                                               
R3Z InChI            InChI                1.03  "InChI=1S/C15H12N2O5S/c18-14-13-10(5-6-23-13)16(15(19)17(14)20)7-9-8-21-11-3-1-2-4-12(11)22-9/h1-6,9,20H,7-8H2/t9-/m0/s1" 
R3Z InChIKey         InChI                1.03  MXQGCMQXTPTJJT-VIFPVBQESA-N                                                                                               
R3Z SMILES_CANONICAL CACTVS               3.385 "ON1C(=O)N(C[C@H]2COc3ccccc3O2)c4ccsc4C1=O"                                                                               
R3Z SMILES           CACTVS               3.385 "ON1C(=O)N(C[CH]2COc3ccccc3O2)c4ccsc4C1=O"                                                                                
R3Z SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)OC[C@@H](O2)CN3c4ccsc4C(=O)N(C3=O)O"                                                                          
R3Z SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)OCC(O2)CN3c4ccsc4C(=O)N(C3=O)O"                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
R3Z "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione" 
R3Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[[(3S)-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R3Z "Create component" 2016-02-04 EBI  
R3Z "Initial release"  2016-08-17 RCSB 
# 
