data_SZZ
#

_chem_comp.id                                   SZZ
_chem_comp.name                                 Sinigrin
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H17 N O9 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-11-16
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       359.373
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SZZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5MEX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SZZ  O15  O15  O  0  1  N  N  N   -6.544   2.316  -21.886   1.678   1.992  -1.562  O15  SZZ   1  
SZZ  S12  S12  S  0  1  N  N  N   -5.916   1.228  -22.564   2.800   1.692  -0.743  S12  SZZ   2  
SZZ  O14  O14  O  0  1  N  N  N   -4.780   1.467  -23.394   4.133   2.042  -1.091  O14  SZZ   3  
SZZ  O13  O13  O  0  1  N  N  N   -5.362   0.417  -21.262   2.527   2.331   0.611  O13  SZZ   4  
SZZ  O11  O11  O  0  1  N  N  N   -7.153   0.544  -23.238   2.792   0.184  -0.539  O11  SZZ   5  
SZZ  N10  N10  N  0  1  N  N  N   -8.353   0.884  -23.566   1.498  -0.368  -0.372  N10  SZZ   6  
SZZ  C09  C09  C  0  1  N  N  N   -9.267   1.810  -23.406   1.356  -1.640  -0.190  C09  SZZ   7  
SZZ  C16  C16  C  0  1  N  N  N   -8.998   3.107  -22.680   2.570  -2.518  -0.027  C16  SZZ   8  
SZZ  C17  C17  C  0  1  N  N  N   -9.578   3.076  -21.305   2.750  -2.861   1.429  C17  SZZ   9  
SZZ  C18  C18  C  0  1  N  N  N   -9.339   2.035  -20.543   2.787  -4.115   1.807  C18  SZZ  10  
SZZ  S08  S08  S  0  1  N  N  N  -10.833   1.642  -24.061  -0.257  -2.347  -0.133  S08  SZZ  11  
SZZ  C1   C07  C  0  1  N  N  S  -11.811   0.448  -23.076  -1.261  -0.861  -0.378  C1   SZZ  12  
SZZ  O5   O06  O  0  1  N  N  N  -12.596  -0.536  -23.810  -1.087   0.021   0.733  O5   SZZ  13  
SZZ  C2   C19  C  0  1  N  N  R  -12.617   1.158  -21.950  -2.736  -1.254  -0.490  C2   SZZ  14  
SZZ  O2   O20  O  0  1  N  N  N  -11.891   1.178  -20.743  -2.922  -2.089  -1.635  O2   SZZ  15  
SZZ  C3   C21  C  0  1  N  N  S  -13.968   0.519  -21.597  -3.584   0.013  -0.637  C3   SZZ  16  
SZZ  O3   O22  O  0  1  N  N  N  -14.699   1.231  -20.594  -4.969  -0.339  -0.669  O3   SZZ  17  
SZZ  C4   C23  C  0  1  N  N  S  -14.754   0.553  -22.897  -3.317   0.935   0.557  C4   SZZ  18  
SZZ  O4   O24  O  0  1  N  N  N  -16.208   0.497  -22.701  -4.048   2.152   0.394  O4   SZZ  19  
SZZ  C5   C05  C  0  1  N  N  R  -14.069  -0.431  -23.897  -1.819   1.243   0.628  C5   SZZ  20  
SZZ  C6   C04  C  0  1  N  N  N  -14.567  -0.175  -25.325  -1.535   2.115   1.853  C6   SZZ  21  
SZZ  O6   O03  O  0  1  N  N  N  -15.884  -0.650  -25.630  -0.159   2.498   1.857  O6   SZZ  22  
SZZ  H1A  H1   H  0  1  N  N  N   -7.911   3.262  -22.609   2.435  -3.434  -0.602  H1A  SZZ  23  
SZZ  H2A  H2   H  0  1  N  N  N   -9.451   3.936  -23.244   3.452  -1.989  -0.388  H2A  SZZ  24  
SZZ  H3A  H3   H  0  1  N  N  N  -10.183   3.895  -20.944   2.849  -2.073   2.161  H3A  SZZ  25  
SZZ  H4A  H4   H  0  1  N  N  N   -9.748   1.991  -19.545   2.689  -4.903   1.075  H4A  SZZ  26  
SZZ  H5A  H5   H  0  1  N  N  N   -8.733   1.222  -20.914   2.916  -4.361   2.851  H5A  SZZ  27  
SZZ  H1   H6   H  0  1  N  N  N  -11.032  -0.122  -22.548  -0.948  -0.358  -1.293  H1   SZZ  28  
SZZ  H2   H7   H  0  1  N  N  N  -12.809   2.190  -22.279  -3.039  -1.792   0.408  H2   SZZ  29  
SZZ  HO2  H8   H  0  1  N  Y  N  -12.402   1.615  -20.073  -2.410  -2.909  -1.611  HO2  SZZ  30  
SZZ  H3   H9   H  0  1  N  N  N  -13.807  -0.526  -21.293  -3.317   0.525  -1.562  H3   SZZ  31  
SZZ  HO3  H10  H  0  1  N  Y  N  -14.214   1.215  -19.777  -5.208  -0.928  -1.397  HO3  SZZ  32  
SZZ  H4   H11  H  0  1  N  N  N  -14.557   1.550  -23.318  -3.632   0.441   1.476  H4   SZZ  33  
SZZ  HO4  H12  H  0  1  N  Y  N  -16.468   1.154  -22.066  -5.005   2.031   0.336  HO4  SZZ  34  
SZZ  H5   H13  H  0  1  N  N  N  -14.457  -1.425  -23.629  -1.514   1.774  -0.274  H5   SZZ  35  
SZZ  H61  H14  H  0  1  N  N  N  -13.865  -0.663  -26.018  -2.161   3.007   1.817  H61  SZZ  36  
SZZ  H62  H15  H  0  1  N  N  N  -14.554   0.912  -25.495  -1.758   1.551   2.759  H62  SZZ  37  
SZZ  HO6  H16  H  0  1  N  Y  N  -16.095  -0.443  -26.533   0.093   3.053   2.607  HO6  SZZ  38  
SZZ  H17  H17  H  0  1  N  N  N   -5.607   0.882  -20.471   2.511   3.298   0.593  H17  SZZ  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SZZ  O6   C6   SING  N  N   1  
SZZ  C6   C5   SING  N  N   2  
SZZ  S08  C09  SING  N  N   3  
SZZ  S08  C1   SING  N  N   4  
SZZ  C5   O5   SING  N  N   5  
SZZ  C5   C4   SING  N  N   6  
SZZ  O5   C1   SING  N  N   7  
SZZ  N10  C09  DOUB  N  E   8  
SZZ  N10  O11  SING  N  N   9  
SZZ  C09  C16  SING  N  N  10  
SZZ  O14  S12  DOUB  N  N  11  
SZZ  O11  S12  SING  N  N  12  
SZZ  C1   C2   SING  N  N  13  
SZZ  C4   O4   SING  N  N  14  
SZZ  C4   C3   SING  N  N  15  
SZZ  C16  C17  SING  N  N  16  
SZZ  S12  O15  DOUB  N  N  17  
SZZ  S12  O13  SING  N  N  18  
SZZ  C2   C3   SING  N  N  19  
SZZ  C2   O2   SING  N  N  20  
SZZ  C3   O3   SING  N  N  21  
SZZ  C17  C18  DOUB  N  N  22  
SZZ  C16  H1A  SING  N  N  23  
SZZ  C16  H2A  SING  N  N  24  
SZZ  C17  H3A  SING  N  N  25  
SZZ  C18  H4A  SING  N  N  26  
SZZ  C18  H5A  SING  N  N  27  
SZZ  C1   H1   SING  N  N  28  
SZZ  C2   H2   SING  N  N  29  
SZZ  O2   HO2  SING  N  N  30  
SZZ  C3   H3   SING  N  N  31  
SZZ  O3   HO3  SING  N  N  32  
SZZ  C4   H4   SING  N  N  33  
SZZ  O4   HO4  SING  N  N  34  
SZZ  C5   H5   SING  N  N  35  
SZZ  C6   H61  SING  N  N  36  
SZZ  C6   H62  SING  N  N  37  
SZZ  O6   HO6  SING  N  N  38  
SZZ  O13  H17  SING  N  N  39  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SZZ  InChI             InChI                 1.03   "InChI=1S/C10H17NO9S2/c1-2-3-6(11-20-22(16,17)18)21-10-9(15)8(14)7(13)5(4-12)19-10/h2,5,7-10,12-15H,1,3-4H2,(H,16,17,18)/b11-6+/t5-,7-,8+,9-,10+/m1/s1"  
SZZ  InChIKey          InChI                 1.03   PHZOWSSBXJXFOR-PTGZALFTSA-N  
SZZ  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](SC(/CC=C)=N/O[S](O)(=O)=O)[C@H](O)[C@@H](O)[C@@H]1O"  
SZZ  SMILES            CACTVS                3.385  "OC[CH]1O[CH](SC(CC=C)=NO[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O"  
SZZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C=CC/C(=N\OS(=O)(=O)O)/S[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O"  
SZZ  SMILES            "OpenEye OEToolkits"  2.0.6  "C=CCC(=NOS(=O)(=O)O)SC1C(C(C(C(O1)CO)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          SZZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       
;[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]
(1~{E})-~{N}-sulfooxybut-3-enimidothioate
;

#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
SZZ  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
SZZ  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
SZZ  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
SZZ  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SZZ  "Create component"          2016-11-16  EBI   
SZZ  "Initial release"           2017-07-05  RCSB  
SZZ  "Other modification"        2020-07-03  RCSB  
SZZ  "Modify internal type"      2020-07-17  RCSB  
SZZ  "Modify linking type"       2020-07-17  RCSB  
SZZ  "Modify atom id"            2020-07-17  RCSB  
SZZ  "Modify component atom id"  2020-07-17  RCSB  
SZZ  "Modify leaving atom flag"  2020-07-17  RCSB  
##
