data_YLZ
# 
_chem_comp.id                                    YLZ 
_chem_comp.name                                  "[(2~{R})-2,3-bis(oxidanyl)propoxy]-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]borinic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H12 B F3 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-19 
_chem_comp.pdbx_modified_date                    2024-01-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        267.998 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YLZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PF8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YLZ B1  B1  B 0 1 N N N N N N -55.591 49.330 -34.703 -0.893 -1.163 -0.012 B1  YLZ 1  
YLZ C1  C1  C 0 1 Y N N N N N -52.698 51.193 -36.162 2.628  0.115  -0.024 C1  YLZ 2  
YLZ C2  C2  C 0 1 Y N N N N N -53.298 50.557 -35.074 1.256  0.373  -0.050 C2  YLZ 3  
YLZ C3  C3  C 0 1 Y N N N N N -54.525 50.111 -35.522 0.649  -0.868 -0.007 C3  YLZ 4  
YLZ C4  C4  C 0 1 N N N N N N -51.357 51.845 -36.242 3.726  1.147  -0.053 C4  YLZ 5  
YLZ C5  C5  C 0 1 N N N N N N -55.676 50.284 -37.807 1.475  -3.238 0.098  C5  YLZ 6  
YLZ C6  C6  C 0 1 N N N N N N -57.622 48.045 -34.607 -3.189 -0.503 -0.077 C6  YLZ 7  
YLZ C7  C7  C 0 1 N N R N N N -57.210 46.616 -34.354 -4.094 0.729  -0.144 C7  YLZ 8  
YLZ C8  C8  C 0 1 N N N N N N -56.797 45.898 -35.622 -5.552 0.284  -0.274 C8  YLZ 9  
YLZ F1  F1  F 0 1 N N N N N N -50.506 51.148 -36.981 4.856  0.609  -0.678 F1  YLZ 10 
YLZ F2  F2  F 0 1 N N N N N N -51.417 53.056 -36.780 3.291  2.272  -0.763 F2  YLZ 11 
YLZ F3  F3  F 0 1 N N N N N N -50.797 51.986 -35.051 4.051  1.520  1.256  F3  YLZ 12 
YLZ N1  N1  N 0 1 Y N N N N N -54.598 50.501 -36.850 1.658  -1.786 0.042  N1  YLZ 13 
YLZ N2  N2  N 0 1 Y N N N N N -53.470 51.169 -37.244 2.791  -1.182 0.036  N2  YLZ 14 
YLZ O1  O1  O 0 1 N N N N N N -56.623 48.693 -35.330 -1.821 -0.089 -0.073 O1  YLZ 15 
YLZ O2  O2  O 0 1 N N N N N N -57.687 44.831 -35.919 -6.386 1.431  -0.453 O2  YLZ 16 
YLZ O4  O4  O 0 1 N N N N N N -55.513 49.266 -33.357 -1.360 -2.503 0.037  O4  YLZ 17 
YLZ H1  H1  H 0 1 N N N N N N -52.886 50.438 -34.083 0.772  1.338  -0.094 H1  YLZ 18 
YLZ H2  H2  H 0 1 N N N N N N -55.400 50.723 -38.777 1.442  -3.640 -0.914 H2  YLZ 19 
YLZ H3  H3  H 0 1 N N N N N N -55.846 49.204 -37.929 2.307  -3.688 0.640  H3  YLZ 20 
YLZ H4  H4  H 0 1 N N N N N N -56.596 50.760 -37.437 0.541  -3.468 0.611  H4  YLZ 21 
YLZ H5  H5  H 0 1 N N N N N N -57.772 48.559 -33.646 -3.402 -1.062 0.834  H5  YLZ 22 
YLZ H6  H6  H 0 1 N N N N N N -58.560 48.060 -35.182 -3.374 -1.137 -0.944 H6  YLZ 23 
YLZ H7  H7  H 0 1 N N N N N N -57.994 46.061 -33.818 -3.820 1.335  -1.008 H7  YLZ 24 
YLZ H8  H8  H 0 1 N N N N N N -55.782 45.494 -35.492 -5.655 -0.377 -1.134 H8  YLZ 25 
YLZ H9  H9  H 0 1 N N N N N N -56.802 46.613 -36.458 -5.852 -0.246 0.630  H9  YLZ 26 
YLZ H10 H10 H 0 1 N N N N N N -57.407 44.397 -36.717 -7.326 1.224  -0.543 H10 YLZ 27 
YLZ O3  O3  O 0 1 N N N N N N ?       ?      ?       -3.936 1.501  1.048  O3  YLZ 28 
YLZ H11 H11 H 0 1 N N N N N N ?       ?      ?       -4.163 1.024  1.859  H11 YLZ 29 
YLZ H12 H12 H 0 1 N N N N N N -56.239 48.753 -33.021 -2.324 -2.584 0.029  H12 YLZ 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YLZ C5 N1  SING N N 1  
YLZ N2 N1  SING Y N 2  
YLZ N2 C1  DOUB Y N 3  
YLZ F1 C4  SING N N 4  
YLZ N1 C3  SING Y N 5  
YLZ F2 C4  SING N N 6  
YLZ C4 C1  SING N N 7  
YLZ C4 F3  SING N N 8  
YLZ C1 C2  SING Y N 9  
YLZ O2 C8  SING N N 10 
YLZ C8 C7  SING N N 11 
YLZ C3 C2  DOUB Y N 12 
YLZ C3 B1  SING N N 13 
YLZ O1 B1  SING N N 14 
YLZ O1 C6  SING N N 15 
YLZ B1 O4  SING N N 16 
YLZ C6 C7  SING N N 17 
YLZ C2 H1  SING N N 18 
YLZ C5 H2  SING N N 19 
YLZ C5 H3  SING N N 20 
YLZ C5 H4  SING N N 21 
YLZ C6 H5  SING N N 22 
YLZ C6 H6  SING N N 23 
YLZ C7 H7  SING N N 24 
YLZ C8 H8  SING N N 25 
YLZ C8 H9  SING N N 26 
YLZ O2 H10 SING N N 27 
YLZ C7 O3  SING N N 28 
YLZ O3 H11 SING N N 29 
YLZ O4 H12 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YLZ InChI            InChI                1.06  "InChI=1S/C8H12BF3N2O4/c1-14-7(2-6(13-14)8(10,11)12)9(17)18-4-5(16)3-15/h2,5,15-17H,3-4H2,1H3" 
YLZ InChIKey         InChI                1.06  YSSTVIJJFZPQNG-UHFFFAOYSA-N                                                                    
YLZ SMILES_CANONICAL CACTVS               3.385 "Cn1nc(cc1B(O)OC[C@H](O)CO)C(F)(F)F"                                                           
YLZ SMILES           CACTVS               3.385 "Cn1nc(cc1B(O)OC[CH](O)CO)C(F)(F)F"                                                            
YLZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1cc(nn1C)C(F)(F)F)(O)OC[C@@H](CO)O"                                                        
YLZ SMILES           "OpenEye OEToolkits" 2.0.7 "B(c1cc(nn1C)C(F)(F)F)(O)OCC(CO)O"                                                             
# 
_pdbx_chem_comp_identifier.comp_id           YLZ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R})-2,3-bis(oxidanyl)propoxy]-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]borinic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YLZ "Create component"     2023-06-19 PDBE 
YLZ "Modify linking type"  2023-06-27 PDBE 
YLZ "Modify aromatic_flag" 2023-08-10 PDBE 
YLZ "Initial release"      2024-01-24 RCSB 
# 
